KEGG T05691: CDA09

Azoarcus sp. DN11: CDA09_00840

Entry

CDA09_00840       CDS       T05691

Name

(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA

K00557

tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]

Organism

azd Azoarcus sp. DN11

Brite

KEGG Orthology (KO) [BR:azd00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:azd03016]
    CDA09_00840
Enzymes [BR:azd01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     CDA09_00840
Transfer RNA biogenesis [BR:azd03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    CDA09_00840

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_25 Methyltransf_15 Methyltransf_12 Methyltransf_31 MTS Methyltransf_4 DREV Methyltransf_11 PrmA

Other DBs

NCBI-ProteinID:

AYH41941

Position

186255..187358

AA seq 367 aa
MSLPRFDPADYPAQLADKVARFASDFAPLGVSAPEVFASEPLHYRLRAEFRMWHHGDGLV
DYAMFAADDPKTPVLLEDFPAAAAPICALMPRLRDALRADDVLRRKIFQVEFLATLSGEL
MVSLVYHRALDEAWAVAARLLAERLGVQVIGRSRKQKIVLDRDWLLEEFDVDGRRLRYQQ
IEGSFTQPNGGVNRQMLGWARRQVMGVGGDLLELYCGNGNFTMALAPLFERVLATEVSKS
SVRAAHYNLEANGIDNITMVRMSSDEISDAFAGGREYRRMKDVDLANYRFSTLFVDPPRS
GLDDATVTLARGFDRILYISCNPVTLRDNVAALADTHDIAAAAVFDQFPYTHHLEAGLLL
TRRTAGG

NT seq 1104 nt +upstreamnt +downstreamnt
atgtcactgccccgtttcgatcccgccgactaccccgcccagctcgccgacaaggtggcc
cgcttcgcgagcgattttgcgccgctgggcgtctctgccccggaggtgttcgcgtccgag
ccgctgcactaccgcctgcgggcggaattccgcatgtggcaccacggcgatggcctcgtc
gactacgcgatgttcgccgcggacgacccgaagacgccggtgctgctcgaagacttcccc
gcggcggcggcgccgatctgcgcactgatgccgcgcctgcgcgacgcgctgcgggcggac
gacgtgctgcgcaggaagatcttccaggtcgagttcctcgcgacgctgagcggcgaactg
atggtgagcctggtctatcaccgcgccctcgacgaggcgtgggcggtggcggcgcgcctg
ctcgcggagcggctgggcgtgcaggtcatcggccgcagccgcaagcagaagatcgtgctc
gatcgcgactggctgctggaagagttcgacgtggacggccggcgcctgcgctaccagcag
atcgaaggcagcttcacgcagcccaacggcggcgtgaaccggcagatgctcggctgggcg
cggcgccaggtgatgggcgtcggcggcgacctgctcgagctctattgcggcaacggcaac
ttcacgatggcgctggcgccgctcttcgagcgcgtgctcgcgaccgaggtcagcaagtcc
tcggtgcgcgccgcgcactacaacctcgaggccaacggcatcgacaacatcacgatggtg
cgcatgtcgagcgacgagatcagcgacgccttcgccggcgggcgcgagtaccggcgcatg
aaggatgtcgatctcgcgaactaccgcttctccacgctcttcgtcgacccgccgaggagc
ggcctcgacgacgccaccgtgacgctcgcgcgcggcttcgaccgcatcctctacatctcg
tgcaacccggtgacgctgcgcgacaacgtcgccgccctcgccgacacgcacgacatcgcc
gccgccgcggtgttcgaccagttcccctacacgcaccacctcgaggccgggctgctgctg
acgcggcgtaccgcgggcggctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

Download RDF

DBGET integrated database retrieval system