KEGG   Azoarcus sp. DN11: CDA09_18660
Entry
CDA09_18660       CDS       T05691                                 
Name
(GenBank) ribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
azd  Azoarcus sp. DN11
Brite
KEGG Orthology (KO) [BR:azd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:azd03016]
    CDA09_18660
Enzymes [BR:azd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     CDA09_18660
Transfer RNA biogenesis [BR:azd03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CDA09_18660
SSDB
Motif
Pfam: RNB AbfS_sensor Myosin_N
Other DBs
NCBI-ProteinID: AYH45375
Position
4038376..4040289
AA seq 637 aa
MFVLFEEDGAFKAGTILADNDSSLQVETSHGKRVKLKSSHVLMRFREPAPGELLNRAEAG
AEELDTAFLWEVCGEDEFAFDEFAAEYHGHAPNAVESASILLRLHSAPMYFHRKGRGRFR
KAPADILQAALAGLEKKRQQAEAIERMRAELVDGRMPAEIAAMLPQLLYRPDRNRVETKA
FEAACVDAGLSAPRLLLKCGALESSYDFHYNRFLFEYFEDGTAFPAFDAPTDPANLPLAR
VAAFSIDDATTTEIDDAFSVTPREGGGWRIGIHIAAPALGFARGSSLDAIARRRLSTVYM
PGNKITMLPDAVVESFTLAAGRDCPAVSLYLDVTAALAVQRHETVVERVPIVANLRHHDI
EPFFNEQVLHDHSGGPDFEWKRELTLLWDLANVLEAGRGKAEDNRNQIDFNFYVDWQTHT
EDGAGYVTISQRKRGSPLDKLVAEMMILANSTWGKLLDEAGVPGLYRVQSGGKVRMSTAA
GPHDGLGVDCYAWSSSPLRRYVDMINQWQIVSVLRDEAPAFAPKSADLMAALRDFDVTYA
AYADFQRQMERYWCLRWLRQQPGVAVDGKVLRDNLVRLDAIPLMVKVPSLPVMLPGTHVR
LTVEHSDLLDVDISARFVTMLAEPDPREAADAALEGN
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgtttgtgctgttcgaagaggatggggcgttcaaggccggcaccatcctcgctgataac
gattcctcgctgcaggtcgagacgtcccacggcaagcgcgtgaagctgaaaagcagccac
gtgctgatgcgctttcgcgagcccgcgccgggcgagctgctgaaccgcgccgaagccggc
gccgaggagctggacaccgccttcctgtgggaagtctgcggcgaggacgagttcgccttc
gacgagttcgccgccgagtaccacggccacgccccgaacgccgtcgagtccgcgagcatc
ctgctgcgcctgcactcggcccccatgtatttccaccgcaagggtcgcggccgcttccgc
aaggcgcccgccgacatcctccaggccgcgctcgccggcctggagaaaaagcgccagcag
gccgaggcgatcgagcgcatgcgcgccgaactcgtcgacggccgcatgccggccgagatc
gccgcgatgctgccgcagctcctctaccgcccggaccgcaaccgcgtcgaaaccaaggcc
ttcgaggccgcctgcgtcgatgccggcctgtccgcgccgcgcctgctgctcaaatgcggc
gcgctggaatcgagctacgacttccattacaaccgcttcctgttcgaatatttcgaggac
ggcacggccttcccggccttcgacgccccgaccgacccggctaacctgccgctcgcgcgg
gtcgccgcgttctcgatcgacgacgcgacgacgaccgagatcgacgacgccttctcggtg
acgccgcgcgaaggcggcggctggcgcatcggcatccacatcgccgcaccggcactcggc
ttcgcgcgcggctcctcgctcgacgcgatcgcgcgccggcgcctgtcgaccgtgtatatg
ccgggcaacaagatcacgatgctgcccgatgcggtcgtcgagtccttcacgctcgccgcc
gggcgcgactgccccgcggtgtcgctgtatctcgacgtcaccgcggcgctcgcggtccag
cgccacgaaaccgtcgtcgagcgcgtgcccatcgtcgcgaacctgcgtcatcacgacatc
gaaccgttcttcaacgagcaggtgctgcacgaccattccggcggccccgacttcgaatgg
aagcgcgagctcacgctgctgtgggacctcgccaacgtcctcgaggccggccgcggcaag
gccgaggacaaccgcaaccagatcgacttcaacttctacgtcgactggcagacgcacacc
gaggacggcgccggctacgtcacgatctcgcagaggaagcgcggttcgccgctcgacaag
ctggtcgccgagatgatgatcctggcgaactccacctggggcaagctgctcgacgaagcc
ggcgttccgggcctgtaccgcgtgcagagcggcggcaaggtgcgcatgtccaccgcagcc
ggcccgcacgacggcctcggcgtggactgctacgcgtggtccagttcgccgctgcgccgt
tatgtcgacatgatcaaccagtggcagatcgtctccgtgctgcgcgacgaagcgcccgcg
ttcgcgccgaaatcggccgacctgatggcggcgctgcgcgacttcgacgtcacctacgcc
gcctacgccgacttccagcgccagatggaacgctactggtgcctgcgctggctgcgccag
caacccggtgtcgccgtcgacggcaaggtgctgcgcgacaacctcgtgcgcctcgacgcg
atcccgctgatggtcaaggtgccctcgctgccggtcatgctgccgggcacgcacgtgcgc
ctgacggtcgaacacagcgacctgctcgacgtcgatatcagcgcgcgcttcgtcacgatg
ctggccgagcccgacccccgggaagccgcggacgcggccctcgagggcaactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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