KEGG   Azospirillum ramasamyi: DM194_11550
Entry
DM194_11550       CDS       T05500                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
azm  Azospirillum ramasamyi
Brite
KEGG Orthology (KO) [BR:azm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:azm03016]
    DM194_11550 (thpR)
Enzymes [BR:azm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     DM194_11550 (thpR)
Transfer RNA biogenesis [BR:azm03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    DM194_11550 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: AWU94843
UniProt: A0A2U9S7I8
Position
complement(2463076..2463618)
AA seq 180 aa
MLRLFVALDLTEDVRQRLAGLAGGVPGARWTEPENLHLTLRFIGEVPEDQAMDIDAALAE
VRAPAFPLVLDGVGVYGSARRARVLWAGVERSEALAHLQAKVESALVRCGLPAEERKFSP
HVTLARLKDAPPDRIGRFLSDRGLFRAGPMAVEHFTLYRSHLGNGGAVYEALREYPLAAA
NT seq 543 nt   +upstreamnt  +downstreamnt
atgctccgcctgttcgtcgccctcgacctgacggaggacgttcgccaaaggctggccggg
ctggccggcggggtgcccggcgcgcgctggaccgagccggagaacctgcacctcaccctg
cgcttcatcggcgaggtgccggaggatcaggcgatggacatcgacgccgcgctggcggag
gtccgggcgcccgccttcccgcttgttctggatggggtcggcgtctacggcagcgcgcgc
cgggcgcgggttctatgggcgggggtggagcgcagcgaggccctggcccatctgcaggcc
aaggtcgaatccgcgctcgtccgctgcggcctgccggcggaggagcggaaattctccccc
cacgtcacgctggcccggctgaaggacgcgccgcctgaccgcatcggccgcttcctgtcc
gaccgcggcctgttccgcgccggcccgatggccgtggagcatttcacgctctaccgcagc
catctcggcaacggcggcgcggtgtatgaggccttgcgggagtatccgctcgccgccgct
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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