KEGG   Azoarcus olearius BH72: azo1596
Entry
azo1596           CDS       T00441                                 
Symbol
holB
Name
(GenBank) DNA-directed DNA polymerase
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
azo  Azoarcus olearius BH72
Pathway
azo03030  DNA replication
azo03430  Mismatch repair
azo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:azo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    azo1596 (holB)
   03430 Mismatch repair
    azo1596 (holB)
   03440 Homologous recombination
    azo1596 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:azo03032]
    azo1596 (holB)
   03400 DNA repair and recombination proteins [BR:azo03400]
    azo1596 (holB)
Enzymes [BR:azo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     azo1596 (holB)
DNA replication proteins [BR:azo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     azo1596 (holB)
DNA repair and recombination proteins [BR:azo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     azo1596 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNApol3-delta_C AAA_16 AAA AAA_22 Mg_chelatase AAA_5 RuvB_N nSTAND3 APP1_cat
Other DBs
NCBI-ProteinID: CAL94213
RhizoBase: azo1596
UniProt: A1K5V8
Position
1752207..1753256
AA seq 349 aa
MIHPWLQPVWSRLVALEGRLPHALLFIGPAGLGKRDLAEMLAARLLCDSPAADGAACGRC
AACAWRLAGNHPDFYHLVPAADAEKEAAAEGGDGEGGTTKAKSAQIVIEQIRDLQEALTV
TGHHSARRVVVVDPAEAMNVFTANALLKLLEEPPAGCTFVLVSSAPRRLLPTLRSRCQQW
SFSRPSSGQLAQWQGHAGAASALLDVVGGMPLAAVRLQEAGGDALLARFVRELGELPAAD
PLHLAGRWEAWLKSKEAIAAGFGLPQLIDWMQRWVADLAALRLGGRVRFFSAQQAALAAL
CERSSVAAITNCYNEFAQIRRVAQHPLNMRLVLEDMLLRYARALSGARG
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgatccatccgtggctgcagccggtctggtcgcgtctggtcgcgctcgaagggcgcttg
ccgcacgcgctgctgttcatcggcccggccggcctgggcaagcgtgatctggccgagatg
ctggctgcgcgcctgctgtgcgacagcccggcggccgacggtgccgcctgcggccgttgc
gccgcctgtgcctggcggctggcaggcaatcacccggacttctatcacctggtgccggcg
gcggacgccgagaaggaagccgccgccgaaggcggcgacggcgagggcgggacgaccaag
gccaagtcggcgcagatcgtgatcgaacagatccgtgacctgcaggaggcgctgacggtg
accggccaccacagcgcacgccgggtggtcgtcgtcgatcctgccgaggcgatgaacgta
ttcaccgccaatgcgctgctcaagctcttggaggaaccgcccgcgggctgcaccttcgtg
ctggtgtcctcggcgccgcgccgcctgctacccacgctgcgcagccgctgccagcagtgg
tcgttttcccgcccgtcgtcggggcaactggcgcaatggcaggggcacgccggtgccgca
agcgcgctgctggatgtagtgggcggcatgcccctggccgcggtccggttgcaggaggcg
ggcggtgacgcgctgctcgcacgcttcgtgcgcgagttgggcgagctgccggcggccgac
cccttgcaccttgccggccgctgggaagcgtggctgaagtccaaggaggcgatcgcggcc
ggtttcggtctgccacagctgatcgactggatgcagcgctgggtggccgatctggcggcg
ctccggctgggcggccgggtacgtttcttctccgcccagcaggctgcgctcgccgcgctg
tgcgagcgcagcagcgtggccgcgataaccaactgctacaatgaattcgcccagatccgc
cgcgttgcccagcatccattgaacatgcggctggtgctcgaagacatgctgttgcgctat
gcgcgcgccctttccggagccagaggatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system