KEGG   Azospirillum sp. TSH58: TSH58p_28480
Entry
TSH58p_28480      CDS       T05449                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
azt  Azospirillum sp. TSH58
Brite
KEGG Orthology (KO) [BR:azt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:azt03032]
    TSH58p_28480 (topA)
   03400 DNA repair and recombination proteins [BR:azt03400]
    TSH58p_28480 (topA)
Enzymes [BR:azt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     TSH58p_28480 (topA)
DNA replication proteins [BR:azt03032]
 Prokaryotic type
  DNA Topoisomerases
   TSH58p_28480 (topA)
DNA repair and recombination proteins [BR:azt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      TSH58p_28480 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom Toprim_4 Toprim_2
Other DBs
NCBI-ProteinID: AWJ87327
UniProt: A0A2S1XS76
Position
TSH58_p02:complement(1592891..1595761)
AA seq 956 aa
MPGSNVVIVESPAKAKTINKYLGSDYTVVASFGHVRDLPARDGSVRPDEDFAMDWELGDR
SKRHIDEIAKAVKGAERVYLATDPDREGEAIAWHLSELLREKRLIDDSKVQRITFNEITK
SAVQAALEAPRDVSRELVDAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLI
CERESEIEVFKPQEYWTIEVGFATPGGSSFTAQLTQLDGKRLDKFALPAREAAEAAVARI
SPQAFSVATVERKQSRRNPSPPFTTSTLQQEASRKLGFGATRTMRTAQRLYEGVDIGGET
VGLITYMRTDGVSLSQEAIEGARNLIGSHWGERYVPAQPRVYKTAAKNAQEAHEAIRPTD
LFRRPEEVASYLENDELRLYELIWKRTLASQMESAVLDQVAVDIASPSKDVVLRATGSVV
VFDGFLKVYQEDRDDGAAEEDQERRLPAMEQGDALARGDISPEQHFTQPPPRYTEASLVK
KLEELGIGRPSTYASILQVLQDRNYVRLDKRRFIPEDRGRLVTAFLKNFFNRYVEYNFTA
DLENKLDEISDGRIDWKTVLRDFWRAFHVAVDGTKDLTITQVLTTLDEELGPHFFPTNAD
SGTPGHDPRVCPVCSQGRLGLKLGKMGAFIGCSRYPECRYTRPLAVANDENGEVQEGPRE
LGNDPETGLPVTVRRGPYGAYIQLGPPPVAAAPAEAVVEEAPADGKKTKGKKKAKVEAPK
PKRVSLPKGMAAADVDLDTALKLLALPRSIGNHPETGEEISAGIGRFGPYLKHGSVYKSL
TPDDDVLTIGINRAVDLLAGAAKKASAPAKTLGDHPKTGKPVTTGAGRFGPYVKHGSVYA
SIPKGTEPDSVTLEQALELLEAKAAKDAAKKGKAPKDAEPAAADGAEAPAKAEKATKAKA
TTAKKEPAKKESAKKDAVKKAAPKKAATKKADAAEADKTDAKTDASEEKPAARKRA
NT seq 2871 nt   +upstreamnt  +downstreamnt
ttgccgggcagcaacgtcgtcatcgtcgaatcgccggccaaggcgaaaaccatcaacaaa
taccttggctcggactacaccgtggtcgccagcttcggccatgtgcgcgaccttccggcg
cgcgacggatcggtgcgtccggacgaggacttcgccatggactgggagctgggcgaccgc
tccaagcgccacatcgatgagatcgccaaggcggtcaaaggggccgagcgcgtctatctc
gccaccgacccggatcgcgaaggggaagccatcgcctggcatttgtcggagctgctgcgc
gaaaagcggctgatcgacgattccaaggtccagcgcatcaccttcaacgaaatcaccaag
agcgccgtccaggccgcgctggaggccccgcgcgacgtctcgcgggagttggtggacgcc
tatctggcccgccgcgccctcgattatctggtgggcttcaccctgtcgccggtgctgtgg
cgcaagctgccgggctcccgctcggcgggccgcgtccagtcggtggcgctgcgcctgatc
tgcgaacgcgagtcggagatcgaggtcttcaagccgcaggagtactggaccatcgaggtg
ggcttcgccacgccgggcggttcctccttcacggcccagctcacccagctcgacggcaag
cggctcgacaagttcgccctgcccgcccgcgaggcggcggaggccgcggtggcgcgcatc
agcccgcaggccttctcggtcgcgacggtggagcgcaagcagagccgccgcaacccctcc
ccgcccttcaccacctcgaccctgcagcaggaggcctcgcgcaagctgggcttcggcgcc
acccgcaccatgcgcaccgcccagcggctgtacgagggcgtggacatcggcggcgagacc
gtcggcctcatcacctacatgcgaaccgacggcgtcagcctgtcgcaggaggccatcgag
ggcgcccgcaacctgatcggttcccattggggcgagcgctacgtcccggcccagccgcgc
gtctacaagaccgccgccaagaacgcccaggaagcgcacgaggccatccgcccgaccgat
ctgttccgccgcccggaggaggtcgcctcctatctggaaaacgacgagctgcggctgtac
gagctgatctggaagcgcactctggccagccagatggaaagcgcggtgctggatcaggtg
gcggtggacatcgcctcgccgtccaaggacgtcgtgctgcgggccaccggttcggtcgtg
gtgttcgacggcttcctgaaggtctaccaggaggaccgcgacgacggcgccgccgaagaa
gaccaggagcgccgcctgcccgccatggagcagggcgacgccctcgcccgcggcgacatc
agcccggaacagcatttcacccagccgccgccccgctacaccgaggcgagcctggtgaag
aagctggaggagctgggcatcggccgcccgtccacctacgcctccatcctccaggtgctg
caggaccgcaattacgtgcggctcgacaagcggcgcttcattccggaagaccgcgggcgt
ctggtcaccgccttcctgaagaacttcttcaaccggtatgtcgagtacaacttcacggcc
gacctggagaacaagctcgacgagatctccgacgggcggatcgactggaagaccgtgctg
cgcgacttctggcgcgccttccacgtcgcggtggacgggaccaaggacctgaccatcacc
caggtcctgaccacgctggacgaggagctggggccgcacttcttcccgaccaacgccgac
agcggcacgccgggccacgacccgcgcgtctgcccggtgtgcagccagggccggctcggc
ctgaagctcggcaagatgggcgccttcatcggctgctcgcgctaccccgagtgccgctac
acccgcccgctcgccgtcgccaacgatgagaacggcgaggtgcaggaaggcccgcgcgag
ctgggcaacgatccggaaaccggcctgccggtgacggtccggcgcggcccctacggcgcc
tacatccagctcggcccgcccccggtggccgccgccccggccgaggcggtggtcgaggaa
gcccccgccgacggcaagaagaccaagggcaagaagaaggccaaggtcgaggcgccgaag
cccaagcgcgtctcgctccccaagggcatggccgccgccgacgtggatctcgacacggcg
ctgaagctgctggccctgccgcgcagcatcggcaaccacccggagacgggagaggagatc
agcgccggcatcgggcgcttcggcccctatctgaagcacggcagcgtctacaagtcgctg
acgccggacgacgatgtgctgaccatcggcatcaaccgcgcggtggacctgctggccggc
gccgccaagaaggcgtcggcccccgccaagacgctgggcgaccatccgaagaccggcaag
ccggtcaccaccggcgcggggcgcttcggtccctacgtcaagcacggctccgtctacgcc
tccatccccaagggcacggagccggacagcgtgacgctggagcaggcgctggagcttctg
gaggccaaggccgccaaggacgccgccaagaagggcaaggccccgaaggacgccgaaccg
gcggcggccgacggtgccgaggcgcccgccaaggccgagaaggcgaccaaggccaaggcg
acaaccgccaagaaggaaccggccaagaaggaatcggccaagaaggacgcggtgaagaag
gccgctccgaaaaaggccgcgaccaagaaggccgatgccgccgaggccgacaagaccgac
gccaagaccgacgcgagcgaggaaaagcccgccgcccgcaagcgggcttga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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