KEGG   Azospirillum thermophilum: DEW08_07285
Entry
DEW08_07285       CDS       T05917                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
azz  Azospirillum thermophilum
Brite
KEGG Orthology (KO) [BR:azz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:azz03016]
    DEW08_07285 (thpR)
Enzymes [BR:azz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     DEW08_07285 (thpR)
Transfer RNA biogenesis [BR:azz03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    DEW08_07285 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS Corona_NS2A
Other DBs
NCBI-ProteinID: AWK86078
UniProt: A0A2S2CNP0
Position
2:complement(264282..264818)
AA seq 178 aa
MIRLFTALDFPEDVRERLAGLGGGVPGARWTEPENLHLTLRFIGEVPDDQAADIAAALSA
VQAPAFDLVLDGVGVFGNSRNARILWAGVERSEALSHLQAKVESALVRAGVPAEERKFSP
HVTLARLKDAPQERIGRFLSDRGLFRAGPVRMEHFTLYRSHLGRTGPVYEAIGEYPLG
NT seq 537 nt   +upstreamnt  +downstreamnt
atgatacgtctgttcaccgcgctcgacttcccggaggatgtccgcgagcgtctcgccggc
ctcggcggcggggtgccgggagcgcggtggaccgagccggagaacctgcacctcaccctg
cgcttcatcggcgaggtgccggacgaccaggcggcggacatcgccgccgccctgtcggcg
gtgcaggcgccggccttcgatctggtcctggacggggtgggggtgttcggcaacagccgc
aacgcccgcatcctgtgggccggggtggagcgcagcgaggcgctgtcccacctgcaggcc
aaggtggaatcggccctggtgcgtgccggcgtcccggcggaggagcggaaattctctccc
cacgtcacgctggcccggctgaaggacgccccccaggagcgtatcggccgcttcctgtcc
gaccgcggcctgttccgcgccggcccggtgcggatggagcatttcaccctctaccgcagc
catctcggccgcaccgggccggtctacgaggcgatcggcgagtatccgctcggctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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