KEGG   Brucella abortus BDW: DK48_1000
Entry
DK48_1000         CDS       T03462                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
babb  Brucella abortus BDW
Pathway
babb02024  Quorum sensing
babb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:babb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DK48_1000 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DK48_1000 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:babb03019]
    DK48_1000 (hfq)
   03036 Chromosome and associated proteins [BR:babb03036]
    DK48_1000 (hfq)
Messenger RNA biogenesis [BR:babb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     DK48_1000 (hfq)
Chromosome and associated proteins [BR:babb03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    DK48_1000 (hfq)
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AIJ52779
Position
1:1022651..1022887
AA seq 78 aa
MAERSQNLQDLFLNSVRKQKISLTIFLINGVKLTGIVTSFDNFCVLLRRDGHSQLVYKHA
ISTIMPSQPVQMFEGEEA
NT seq 237 nt   +upstreamnt  +downstreamnt
atggctgaacgatcgcaaaatctacaagacctctttctgaattctgtccgcaagcagaag
atttctctaacgatcttccttatcaatggcgtgaaattgaccggcattgtaacgtctttc
gataatttctgcgtgcttctgcgtcgtgatggtcattcgcagcttgtttacaagcatgct
atttcgacaatcatgccgagccagcctgtacagatgtttgaaggcgaggaagcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system