KEGG T03462: DK48

Brucella abortus BDW: DK48_1984

Entry

DK48_1984         CDS       T03462

Symbol

gyrB

Name

(GenBank) DNA gyrase, B subunit

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

babb Brucella abortus BDW

Brite

KEGG Orthology (KO) [BR:babb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:babb03032]
    DK48_1984 (gyrB)
   03400 DNA repair and recombination proteins [BR:babb03400]
    DK48_1984 (gyrB)
Enzymes [BR:babb01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     DK48_1984 (gyrB)
DNA replication proteins [BR:babb03032]
Prokaryotic type
  DNA Topoisomerases
   DK48_1984 (gyrB)
DNA repair and recombination proteins [BR:babb03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DK48_1984 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook GyrB_insert HATPase_c_3 Phage_cap_P2 ABATE

Other DBs

NCBI-ProteinID:

AIJ51704

Position

1:1989903..1992326

AA seq 807 aa
MNSEAPAEYGADSIRVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDEALAGHA
TLVTVTLNADGSCTVTDNGRGIPTDIHKEEGVSAAEVIMTQLHAGGKFDQNSYKVSGGLH
GVGVSVVNALSIWLKLKIRRAGKIHEMSFTHGVADAPLVVTGDAGSETGTEVSFLPSPDT
FSMVEFDYETLERRLRELAFLNSGVRIKLADRRHADVKEQELHYDGGLVEFVKYIDQSKK
SLLEEPIYIRSEKDGMTVEVAMWWNDSYHEKVLCFTNNIPQRDGGTHLAGFRGALTRQIT
GYADSSGMTKKEKVQLTGDDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPVVEGLVN
EALSTWLEEHPAGGKIVVEKVIQAAAAREAARKARDITRKSNLSVTSLPGKLADCQERDP
AKSEIFIVEGDSAGGSAKSGRSRQNQAILPLRGKILNVERVRFDRMISSDQVGTLITALG
TSIGKDETHGFNADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHIYIAQP
PLYKVTRGKSSQYIKNEAAFEDFLIETGLEETTLELVTGEMRAGPDLRSVVEDARTLRQL
LHGLHTRYDRSVVEQAAIAGLLNPDASRDNATAQHSADTVAKRLDMISEETERGWSGHVM
EDGGYRFERMVRGVKDIAILDMALLGSADARQVDRVAGRMAEIFMEPPVLRRKDKVESLS
GPVALLDAVFATGRKGLTLQRYKGLGEMNAEQLWETTLDPNVRSLLQVKVNDATDADSLF
SRLMGDEVEPRREFIQDNALNVANLDV

NT seq 2424 nt +upstreamnt +downstreamnt
atgaattccgaagcccccgccgaatatggcgcggattccattcgtgttctgaaaggtctg
gatgctgttcgcaagcgccccggcatgtatatcggcgacacggacgacggctccggcctg
catcacatggtctatgaagtcgtggacaacgccatcgacgaagcactggccggacatgcc
acgctcgtcaccgtaacgctcaatgccgacggctcctgcaccgtgaccgacaacgggcgc
ggcatcccgaccgacatccacaaggaagaaggcgtttcagctgccgaggtcatcatgacc
cagcttcatgcgggcggcaaattcgaccagaattcctacaaggtttccggcggcctgcat
ggcgtcggcgtttcagtggtgaatgcgctgtcgatctggctgaagctgaaaatccggcgc
gcgggcaaaatccatgaaatgagcttcacacacggcgttgccgatgcgcccttggtcgta
accggcgatgcaggcagtgaaaccggcacggaagtgagcttcctgccctcgcctgacacc
ttcagcatggtcgaattcgactatgaaacgctggaacgccgcctgcgcgaacttgccttc
ctcaattcgggcgtgcgcatcaagctcgccgaccgccgccatgcggatgtgaaggaacag
gaactgcattatgacggcggcctggtcgaattcgtcaaatatatcgaccagagcaagaag
tcgcttctggaagagcctatctatattcgcagcgaaaaggatggcatgacggtggaagtc
gccatgtggtggaacgattcctaccacgagaaggtgctgtgcttcaccaacaacatcccg
cagcgcgacggcggcacgcatctggccggtttccgcggcgcgctgacccgacagatcacg
ggctatgcggactcttccggcatgacgaagaaggaaaaggtacagcttaccggcgacgat
tgccgcgagggcctgaccgccgttctttccgtgaaggtgccggatccgaaattctcctcg
cagaccaaggacaagcttgtttcctccgaagtgcgcccggtggtggaaggcctcgtcaat
gaagcgctttccacatggcttgaagaacatccggcaggcggcaagatcgttgtcgagaag
gtcattcaggcggcggcggcccgcgaagccgcccgcaaggcgcgcgacatcacccgcaag
agcaatctcagcgtgacgtccctgcccggaaagcttgccgattgccaggagcgcgatccg
gccaagtccgaaatcttcatcgtcgagggcgattcggcaggcggttccgccaagagcggg
cgctcgcgccagaatcaggccattctgccgctgcgcggcaaaatcctgaacgtggaacgc
gtgcgtttcgaccggatgatttcatccgatcaggtgggcaccctcatcacggcgcttggc
acctccatcggcaaggatgaaacgcacggcttcaacgccgacaagctgcgttatcacaag
atcatcatcatgaccgacgccgacgtcgatggcgcccatattcgtacgcttctgctcacc
ttcttcttccggcagatgccggaactgatcgaacgcgggcatatctatatcgcgcagccg
ccgctctataaggtgacacgcggcaagtcttcgcaatatatcaagaacgaagccgccttt
gaggatttcctcatcgaaaccggccttgaagaaacgacactggaactggtgactggcgaa
atgcgcgccgggccggatttgcgctcggtggtggaggatgcgcgcacgctgcgtcagctt
ctgcacggcctgcacacccgctatgaccgcagcgtggtggaacaggcggcaattgccggc
ctgctcaaccccgatgcctcaagggacaatgcaacggcacagcattccgccgatacggtt
gccaagcgtctcgacatgatttcggaagagaccgagcgcggctggagcggccatgtgatg
gaagacggcggctatcgcttcgagcgtatggtgcgcggtgtaaaggatatcgccattctc
gacatggccctgctcggctcggccgatgcccgccaggtcgaccgcgttgcgggccgcatg
gctgaaatcttcatggagccgccggtgctgcgccgcaaggacaaggtggaatcgctttcc
ggcccggtggccctgcttgacgccgtgtttgcaaccggccgcaagggtctgaccctccag
cgttacaaaggcttgggcgaaatgaacgccgaacagctttgggaaacgacacttgatccg
aatgtgcgttcgctcctgcaggtgaaggtgaacgatgcaaccgatgccgattccctcttc
tcgcgccttatgggcgacgaggtggagccgcggcgtgaattcattcaggataatgcgcta
aacgtcgccaatctggacgtttga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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