KEGG   Brucella abortus NCTC 10505: DO78_1393
Entry
DO78_1393         CDS       T03686                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
babc  Brucella abortus NCTC 10505
Pathway
babc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:babc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DO78_1393 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:babc03400]
    DO78_1393 (uvrB)
DNA repair and recombination proteins [BR:babc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DO78_1393 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DO78_1393 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 Kinesin Flavi_DEAD SWI2_SNF2 Microtub_bd
Other DBs
NCBI-ProteinID: AIJ58195
Position
1:1402472..1405294
AA seq 940 aa
MASSKDKHIRDSRNKADGFGEAPQAGFSGAPLSGTIADWAKEIGDEAAKPRAKNPKQPKK
IPERSKEASRTGRGTSMGGAASAKERTAAGLNPVAGLDISLEEAAGLSPSGATATVQALA
DLIQSGNPLFKHGELWTPHRPARPEKSEGGIPIRMETSFEPSGDQPTAIRDLVEGLENQD
RTQVLLGVTGSGKTFTMAQVIEKTQRPALILAPNKTLAAQLYGEFKSFFPNNAVEYFVSY
YDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVE
TYTAMTFEMKIGDRLDQRQLLADLVAQQYKRQDINFVRGSFRVRGDTIEIFPAHLEDRAW
RISLFGDEIETITEFDPLTGQKTGDLKSVKIYANSHYVTPRPTLNQAIKSIKEELKHRLD
ELTRAGRLLEAQRLDQRTTFDLEMLEATGSCAGIENYSRYLTGRKPGEPPPTLFEYIPDN
ALVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPQTIAV
SATPGNWEMEEAGGVFAEQVIRPTGLIDPPVEIHPAKTQVDDVLGEIRNTAKKGYRTLVT
VLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAFDVLVGINLLREGLDI
PECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADNMTGSMQRAIDETNRRR
EKQQAYNEAHGITPASVKKNISDILDSVYERDHVRADISGFAEEGAMMGNNLASHVEYLE
KQMRDAAADLDFEKAARLRDEIKRLRETELAIADDPMAREVELESPVTGRTKGRHNAGRK
MHRVVTDDEGGKSLFQKPSLDNMGPGTDMAKPRHDGPLPTAAESRFRKNTLDEMTVKRTE
IPAGGEAPIRRERAGIGSYEDPAEVSRKKRRPGKTGRPGR
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggcttcctcaaaagacaaacatatccgggattcgcgcaacaaggctgacggcttcggc
gaagcgccgcaggccgggttttccggcgcgcctttgtccggcactatcgcggactgggca
aaggaaatcggcgacgaggctgcaaaaccacgcgcaaagaaccccaaacagccgaagaaa
attcccgagcgcagcaaggaagcctcgcgcacgggacgcggcacgtccatgggcggcgcg
gcttccgccaaggagcgcacagccgctggcctcaaccccgtagcaggccttgatatcagt
ctcgaagaggctgcgggcctcagcccatccggtgcgaccgcaaccgtgcaggcgctggcc
gacctgatccagtcgggcaatccgctgttcaaacatggcgagctgtggacgccgcaccgc
cctgcccgcccggaaaaatccgaaggcggcattccgatccgcatggaaacgagtttcgag
ccgtcaggcgaccagccgacggccattcgtgacctcgtggaaggtttggaaaatcaggac
cgtacgcaggttttgctcggcgtgacaggttccggcaagaccttcaccatggcccaggtg
atcgaaaagacgcagcgcccggcgctgattctggcgccgaacaagacactggccgcgcag
ctatatggcgagttcaaaagcttctttccgaacaatgcggtggaatatttcgtttcctat
tacgattattaccagccggaagcctatgtgccgcgctcggacacctatatcgagaaggaa
tcgtcgatcaacgagcagatcgaccgtatgcgccactcggccacccgtgcgctgctcgaa
cgcgacgatgtgattatcgtcgcctctgtatcgtgcatctacggtatcggctcggtcgaa
acctatacggccatgacctttgaaatgaagatcggcgaccggctcgaccagcggcaattg
ctcgccgatctcgtggcgcagcaatataagcgccaggatatcaacttcgtgcgtggttct
ttccgcgtgcgcggtgacacgatcgaaatattccctgcccacctggaagaccgcgcctgg
cgcatctcgctgttcggtgatgaaatcgaaaccattaccgagttcgatccgctgaccggc
cagaaaaccggcgacctgaaatcggtcaagatttacgcaaattcgcactatgtcacaccg
cgcccgacgctcaatcaggccatcaaatcaatcaaggaggagctgaaacaccgccttgat
gaactgacccgcgcaggccgcctgctggaagcccagcgccttgatcagcgcacgactttc
gatctggaaatgctggaagcaaccggctcctgcgcaggcatcgaaaattattcgcgctat
ctcacgggccgcaaacccggcgagccgccgccgaccctgtttgaatatattcccgacaat
gcgctggttttcatcgatgaaagccacgtcacggttccgcagatcggcggcatgtatcgc
ggcgacttccgccgcaaggcgacgcttgccgaatatggtttccgcctgccctcctgcatg
gacaaccgcccgctccgcttcgaggaatgggacgccatgcgcccgcagaccatcgccgtt
tcggcaacgcccggaaactgggagatggaggaagcgggcggcgtcttcgcagaacaggtc
atccgcccgaccggcctcatcgacccgccggtcgaaatccatcctgccaagacgcaggtg
gacgatgttctgggcgaaatccgcaatacggcgaagaagggctatcgcacgctcgtcacc
gtgctgaccaaacgcatggcggaagaccttaccgaatatctgcacgaacaaggcgtgcgc
gtgcgctatatgcactcggatatcgacacgctggagcgcatcgaaatcattcgcgacctg
cggcttggcgctttcgacgtgctggtcggcatcaaccttctgcgcgaagggctcgacatt
cccgaatgcggtttcgtcgccattctcgatgccgacaaggaaggcttcctgcgttccgaa
acctcgcttatccagacgatcggccgcgccgcgcgtaatgtggacggcaaggtcattctc
tatgcggataacatgaccggctcgatgcagcgcgcgatcgacgaaacgaatcgccgccgc
gaaaagcagcaggcctacaacgaggcgcatggcatcacgcctgcttccgtgaagaaaaac
atctcggatattctcgattcggtctatgaacgcgaccatgtgcgcgccgatatttccggc
tttgccgaagaaggcgcgatgatgggcaacaatctggcctcccatgtcgaatatctggaa
aagcagatgcgcgatgcggctgccgatctggacttcgagaaggctgcgcgcctgcgcgac
gaaatcaaacgcctgcgcgaaaccgagcttgcgattgcggacgacccgatggcgcgtgag
gtggaactggaaagccccgttacggggcggaccaaaggtcgccacaatgcgggccgcaag
atgcatcgcgtggttacggatgacgaaggcggcaagtctttgttccagaagccatcgctc
gacaatatgggaccgggaacggatatggcgaagccccgccatgacggcccgcttccgaca
gccgcggaaagcaggttccgcaagaacacgctggatgaaatgaccgtgaaacgcaccgag
atcccggcgggcggcgaggcgcccatccggcgcgaacgggctggcatcggctcatatgaa
gatccggcggaggtctcccgcaagaagcgtcgccccggcaagacaggccggccggggcgt
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (12)   
   Pfam (12)   
All databases (19)   

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