KEGG   Bacillus sp. Pc3: SB24_16335
Entry
SB24_16335        CDS       T03544                                 
Name
(GenBank) recombinase RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bacp  Bacillus sp. Pc3
Pathway
bacp03410  Base excision repair
bacp03430  Mismatch repair
bacp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bacp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SB24_16335
   03430 Mismatch repair
    SB24_16335
   03440 Homologous recombination
    SB24_16335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bacp03400]
    SB24_16335
DNA repair and recombination proteins [BR:bacp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     SB24_16335
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     SB24_16335
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SB24_16335
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 PGM_PMM_II Metal_resist
Other DBs
NCBI-ProteinID: AJC26630
Position
3390775..3393135
AA seq 786 aa
MLASKMRWEIQQPDQEKVKSLTEQLDITPLVASLLVKRGFDTAESARLFLHTKDADFYDP
YELKGMREAVDRIKLAVSQGEPIMIYGDYDADGVTSTSVMLTALRQLSADVDFYIPDRFT
EGYGPNEQAFRSIKERGFSLIITVDTGIAAVHEAEVAKELGLDVIITDHHEPGPELPDVF
AIIHPKQPGCGYPFKELAGVGVAFKLAHALTGSLPEAMLDLAAIGTVADLVPLHDENRLI
ASLGIERLRTTNRPGLKALIKLSGGDIGQADEETIGFQVAPRLNAVGRIEQADPAVHLLM
TEDQFEAEELASDIDRLNKERQKMVKTMTEEAVEMVQQQGGNPSAIVVAKAGWNPGVVGI
VASKLAERFYRPAVVLGIDEEQGIAKGSARSIRGFNLFTSLSQCRDILPHFGGHPMAAGM
TLKAEDVAELRDRLNQMAEETLTEEDFIPVQEVDLVCGVEDITVESITELNMLSPFGMLN
PKPHVMVKNAVLDDVRLIGANKNHVKMTVKSDSAVLDCVGFNKGELEAGIVPGSTISIVG
EMSINEWNNRKKPQLMIKDAAVPEWQLFDIRGKRTWEDTVTALPKEKRVLISFNEKTAQK
LRAKELSGELAGITSESEAEALQLDGKYAVFLDVPPSADRLQHLLDGKKPERIYFVFINH
EEHFLSSFPSRNDFKWFYAFLLKRGAFDFGKHGSELARHRGWSIDTINFMTKVFFDLGFV
KIEDGVLSVVSGAKKRDLADSQTYQVKQQLMELDQKLNYSAAHELKEWLNKLMNQGSEAY
ESTRRT
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgttagcgtcaaaaatgcgctgggaaatccagcagccggatcaggaaaaagtcaaatca
ctcacagaacaattggacataacacctcttgtggcatcactgcttgtaaaaagaggtttt
gatactgccgaaagcgcaaggctgtttttacatacaaaggatgcagacttttatgacccg
tatgaattaaagggaatgcgggaagcagttgatcggataaaactggcggtttctcaaggg
gaaccgattatgatttacggagattacgatgcagacggcgttacaagcacgtcggtgatg
ctgacggcactgagacagctgtcggcggacgttgacttttatattcccgaccgtttcaca
gaaggctacggcccgaatgaacaggctttccgctccataaaagagcggggattttcgctg
atcattacagtggatacgggaatcgccgccgtccatgaagctgaagtcgcaaaagagctg
ggcttagacgtcattattaccgaccaccatgagccgggacccgagcttcctgacgtattt
gcgatcatccacccgaagcagccgggctgcggctatccgtttaaagaattggccggcgtc
ggtgtggcgtttaagcttgcccacgcgcttacgggttctttgccggaagctatgctggac
ttggcggcaatcggtacggttgcagatctggtgcctcttcatgatgaaaacagattaatt
gcgtcactcggaatcgaaaggcttcggacgacaaatcggccgggcctcaaagccctgatt
aagctttccggcggagatatcggacaagctgatgaggaaacgatcggatttcaggtcgcg
ccgaggctcaatgccgtcggaagaatagaacaggccgatcccgccgtgcatctgctgatg
accgaagatcagtttgaagcggaggaactggcttcggatattgaccggctgaataaagag
cggcagaaaatggtgaaaaccatgaccgaagaggctgttgaaatggttcagcagcaaggc
ggaaacccgtctgccattgtagtggcaaaagccggctggaatccgggagtcgtcggtatt
gtcgcatcgaagctggctgaacgtttttaccggcccgctgttgtgcttgggatagatgag
gagcagggaatcgctaaagggtcggcgcgaagcatcagaggcttcaacctgtttacgagc
ctttcacagtgcagagacattcttcctcatttcggcgggcatccgatggcggcaggaatg
acgttgaaggctgaagatgtggcggaattaagggacaggctgaatcaaatggctgaagaa
acccttacggaagaggattttattcccgttcaggaggttgatcttgtctgcggcgtagaa
gacataaccgttgaaagcattacagaattgaatatgctgtcgccgttcggcatgcttaac
cctaaaccgcatgtgatggtgaaaaatgctgtgcttgatgatgtgcgcctgatcggagcg
aataaaaaccacgtgaaaatgacggtgaaaagtgattccgccgtccttgactgcgtcggc
tttaacaaaggagagcttgaagccggaattgtccccggatcaacgatttccattgtcggc
gagatgtccattaatgaatggaacaacagaaagaagccccagctgatgattaaagacgct
gcggtgccggaatggcagctttttgatatcaggggcaagcggacgtgggaagacacggtc
accgcgctgccgaaggaaaaacgggtgctcatcagctttaacgaaaaaaccgctcagaag
ctccgtgcaaaagagctgtcgggcgagctggccgggatcacatcggaatccgaggcggaa
gctctccagcttgacggaaaatatgccgtttttctggatgtgccgccgtcagcggatcgc
ctgcagcatttgcttgacggaaagaagccggaacggatttattttgtttttatcaatcat
gaagaacatttcctgtcctcatttccatctcggaatgatttcaagtggttttacgcattt
ctcttgaaaaggggcgcttttgacttcggcaagcatggttcagagcttgcgagacacaga
ggatggtcaattgacacaatcaatttcatgacaaaggtgttttttgatctcggttttgtt
aaaatagaagatggtgtgctgtctgtcgtgagcggcgcgaaaaaacgcgacctggcagat
tcgcaaacctatcaggtaaaacagcagctgatggaattagaccagaagctcaattattcc
gcagcccatgagctgaaggaatggctgaataagctgatgaaccaaggttcagaagcttat
gaaagtacgaggaggacatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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