KEGG   Bifidobacterium actinocoloniiforme: AB656_02655
Entry
AB656_02655       CDS       T04036                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
bact  Bifidobacterium actinocoloniiforme
Brite
KEGG Orthology (KO) [BR:bact00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bact02048]
    AB656_02655
Enzymes [BR:bact01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     AB656_02655
Prokaryotic defense system [BR:bact02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   AB656_02655
SSDB
Motif
Pfam: EcoR124_C SWI2_SNF2 HSDR_N ResIII DEAD
Other DBs
NCBI-ProteinID: AKV55314
UniProt: A0A086Z0Q8
Position
complement(653235..656342)
AA seq 1035 aa
MNEAAAYLIDPIALSSESTVVAEYEAPAAEQAEYQSEAELEKEFIRILQSQAYEYLPIHT
EDDLISNLRARLEDLNHIVFTDEEWERFFKTSITDSNEGITEKTVHIQRDSVQVLRRDDG
SSKNIMLIDKKDIHNNKLQVINQYEVPGQADGGKAKYSNRYDVTILVNGLPLIHVELKRR
GVDLREAFNQINRYQRDSFWAGSGLFEYVQIFIISNGTLTKYYSNTTRRQQIGEAAKQGK
STRRQTSNSYEFTSWWADATNKPIMDLRSFTKTFLSKHTILNVLTKYCVLTADNLLLVMR
PYQIVATERILRRIVQSTNYRKLGTRAAGGYVWHTTGSGKTLTSFKTAQLATQMADVDKV
LFVVDRKDLDYQTMREYDRFEKGAANSNTSTKVLKKQLEDSNARIIITTIQKLSTFIKAN
PDHPVYGQHVVIIFDECHRSQFGDMHTMITHAFKRYNLFGFTGTPIFAKNSGTGGKPKLR
TTEQAFGDKLHTYTIVDAIRDKNVLPFRIDYVDSIGEGRVTDTQVAGIDTERALLDSRRI
YQIVRYTLDHFAQKTRRMDSYQHSVVTNIEDVIVSHRKVEEIKQSRRVHGFNALFATASI
EAAKRYYIEFQHQQADLAPDQRLKIGLIYSYAPNEAETDGILDDEDCSAQALSKDDRDFL
EDVIADYNDMFQTSYDTSSEKFQNYYKDLSMRLKNREIDMVIVVNMFLTGFDATTLNTLF
VDKNLKMHGLIQAFSRTNRILNSVKTYGNIVSFRNLEKETDEALELFGNKDAQGIVLLKP
FKDYYEEYKQKVQELLGSYPIGQRIGSEQEQKNFVGLFGSILRLQNILTSFDDFEGQEIL
SERESQDYRSVYLDLYSTFRSAEKADKENINDDLTFEIELVKQTEVNVDYILMLVDKYRQ
KHGNGEDKEIRTEINKAVSASPSLRNKKDLIDAFVGSVSMNGTVDEQWRTFLNRRRQEEL
QSIIDEEHLKAEPTKQFIKESFRNGTLQTSGTSITAILPPISRFVARGGLGEKKQHVIDK
LSVFFKRFSGLGQDE
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgaacgaagcagccgcatatctgattgatccgattgccttgtcttcggagagtaccgtc
gttgccgaatatgaggctccggctgctgagcaggctgaataccagtcggaggccgagctc
gagaaggagttcatccgaatcctacaatcgcaggcatacgagtatctgcccatacacacc
gaggacgatctgatctccaacctccgtgctcggctcgaggatctgaaccatatcgtcttc
accgacgaggagtgggagcggttcttcaagaccagcatcaccgacagcaacgagggcata
acggagaagacggtgcacatccagcgtgacagcgttcaggtgctccgccgagacgacggc
agcagcaagaacatcatgctgatcgacaagaaggacatccacaacaacaagcttcaggtc
atcaaccaatacgaggtccccggtcaagcagacggaggtaaggccaagtactcgaaccgg
tatgatgtgaccatcctcgtcaatggtctgcctttgatccatgtggagctcaagcggcgg
ggcgtggacctgcgggaggccttcaaccagatcaaccgctaccagcgtgattccttctgg
gctgggtccggcctcttcgagtatgtgcagatcttcatcatcagcaacggcacccttacc
aagtactactccaacaccacacggcgtcagcaaatcggtgaggctgcaaaacagggcaag
tcgacgcggaggcagacctccaacagctatgagttcaccagttggtgggcggatgccacc
aacaaaccgatcatggacctgcgctccttcaccaagaccttcctgtcgaagcacaccatt
ctgaacgtcctgaccaagtactgcgtcctcaccgccgacaacctgctgctggtcatgcgc
ccctaccagatcgtcgccacggagcgcatcctgcggcgcatcgtgcagtccaccaattac
cgcaagctgggcaccagagcagcaggtggctacgtctggcatacgacgggatcaggcaaa
accctgaccagtttcaagacggcgcagttggcaacccagatggccgatgtggacaaggtt
ctcttcgttgtcgatcgaaaggacctcgactaccagaccatgcgggagtatgaccgtttc
gagaagggggccgcgaattccaacacctccaccaaggtgctcaagaagcagctggaggac
tccaacgcccgcatcatcatcacaaccattcagaagctgtcgaccttcatcaaggccaac
cctgaccatccggtctacggtcagcatgtcgtgatcatcttcgacgagtgccatcgctcc
cagttcggcgacatgcacaccatgatcacccacgccttcaagcgatacaacctcttcggt
ttcactggcacacccatcttcgccaagaactcaggaaccggcggcaaacccaagctcaga
acgaccgaacaggcctttggcgacaagcttcacacctacaccatcgtcgatgcgatccgt
gacaagaacgtccttcccttccgcatcgactacgtcgacagcatcggggaaggaagggtg
acggatacccaggtcgccggaatcgacaccgagcgggcattgctcgacagcagacgaatc
taccagatcgtcagatacactctcgatcacttcgcccagaagaccagacggatggacagc
taccagcattcagtggtgaccaacatcgaggatgtgattgtctcccatcgcaaggttgag
gaaatcaaacagtcccggcgggtgcatgggttcaacgccttgttcgccacagcctccatt
gaagccgccaaacgctactacatcgaattccagcatcagcaggccgatcttgccccggac
caacggctcaagattggactgatctactcctatgcacccaacgaggcggaaacggacggc
atcctggacgacgaggattgcagcgcccaggccctaagcaaggatgaccgtgacttcctc
gaagacgtcatcgctgactacaacgacatgttccagacgagttacgacacaagctcagag
aagttccagaactactacaaagacctctccatgcggctgaagaaccgcgagatcgacatg
gtcatcgtggtcaacatgttcctcaccggcttcgatgcgaccaccttgaacacgctcttc
gtcgacaagaacctgaagatgcacggactgatccaggctttctccaggaccaaccgaatt
cttaactccgtaaagacatacggcaatatcgtctctttccgaaaccttgagaaggaaacc
gatgaggctttggaactcttcggcaacaaggacgcccaaggcatcgtgctgctcaagccc
ttcaaggactactacgaggaatacaaacaaaaggtccaggagctgctcggttcctatccg
atagggcagcggatagggagcgaacaggagcagaagaacttcgttgggctcttcggcagc
atcctcaggttgcagaacatcctcaccagtttcgatgacttcgagggtcaggagatcctg
tccgaacgggagagccaggattaccggagcgtctacctggatctatactcgactttccgg
tcagcagaaaaggccgacaaagagaacatcaacgatgatctgaccttcgaaatcgagctg
gtcaagcagaccgaggtgaacgtcgactacatcctcatgctggtggacaaataccggcag
aagcatggcaacggcgaggacaaggagatacgaaccgagatcaacaaggccgtctcagcc
agcccttcgctgcgcaacaagaaggatctgatcgacgcctttgtcggttcggtatccatg
aatgggacggtggatgagcagtggcgaaccttcctcaaccgcagacgtcaggaggagctt
cagtccatcattgatgaagagcacctcaaggctgaaccgacgaagcagttcatcaaggag
tctttccgtaacggcaccttgcagacaagcggcacgtccattacggccatccttccgccc
atctcacgattcgtcgccaggggaggccttggagagaagaaacagcatgtcatcgacaag
ctcagcgtcttcttcaaacgattctccggattgggacaagacgaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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