KEGG   Balaenoptera acutorostrata scammoni (minke whale): 103000944
Entry
103000944         CDS       T03086                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin 54
  KO
K14308  nuclear pore complex protein Nup54
Organism
bacu  Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03013  Nucleocytoplasmic transport
bacu05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:bacu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103000944 (NUP54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    103000944 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bacu03019]
    103000944 (NUP54)
Messenger RNA biogenesis [BR:bacu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103000944 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 103000944
NCBI-ProteinID: XP_007165624
UniProt: A0A383YS60
Position
Un
AA seq 509 aa
MAFNFGAPSGTSGTAAATAAPAGGFSGFGTPSTTAGSAFSFSAPANTGTTGLFGGAQNKG
FGFGTGFGTTAGTSTGLGTGLGTGLGFGGFHTQQQQQQQTTLGGLFSQPTQAPAQSNQLI
NTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNSNIPPVEFTQENPFCRFKAVGY
SCMPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQT
EVVIYVVERSPNGTSRRVPATTLYAHFEQTNIRTQLQQLCVTLSMTRTELSPAQIKQLLQ
NPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDI
GELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQ
CELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLI
SIIKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggccttcaactttggggctccctcgggcacctctggtacagctgcagccaccgcggcc
cccgcgggtgggtttagtggatttggaacgccgtctacaacagcaggttctgcgttcagc
ttttctgctccagctaacacgggcactactggactcttcggtggtgctcagaacaaaggt
tttggatttggcactggctttggtacaacagctggaactagtactggtttaggtactggt
ttgggaactggacttggatttggaggatttcatacacagcagcagcagcagcaacagact
acattaggtggtctcttcagccagcctacacaagctcctgcccagtccaaccaactgata
aatactgcaagtgctctttctgctccaacactgctgggagatgagagagatgctattttg
gcaaaatggaatcaactacaggccttttggggaacaggaaaaggatatttcaacagtaac
attccaccagtggaattcacacaagaaaacccattttgccgttttaaggcagtaggttat
agttgtatgcccaataataaagatgaagatgggctagtggttttagttttcaacaaaaaa
gaaacagatattcgaagccagcaacagcaattggtagaatcattgcataaagttttggga
ggaaaccagacccttactgtaaatgtagagggtattaaaacattgccagatgatcagaca
gaagttgtcatttacgttgttgagcgttctccaaatggtacttcaagaagagttccagct
acaacactatatgcccattttgaacaaaccaatataagaacacagttgcagcaactttgt
gtaaccctttctatgactagaacagaactttctcctgcacagatcaaacagcttttacag
aatcctcccgctggtgttgatccaattatctgggaacaagccaaggtggataaccctgat
tctgaaaagttaattcctgtaccaatggtgggtttcaaagaacttcttcgaagactgaag
gttcaagatcagatgactaaacagcatcagaccagattagatatcatatctgaagatatt
ggtgaattacagaagaatcaaactacaactatggccaaaattgcacaatacaagaggaaa
ctcatggacctttcccacagaaccttacaggtcctaatcaaacaggaaattcagaggaag
agtgggtatgccatccaggctgacgaagagcagttgcgagttcagctagatacaattcag
tgtgaactaaatgcccctactcagtttaagggccgactgaatgaactgatgtcccaaatc
aggatgcagaatcattttggagcagtcaaatctgaagaaagatattacatagatgcagat
ctgttacgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccacttgatt
agcatcataaaagatgacttagaagatatcaagttggtagaacatggattgaatgaaacc
atccacatcagaggtggtgtcttcagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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