KEGG   Bifidobacterium adolescentis BBMN23: BBMN23_0377
Entry
BBMN23_0377       CDS       T03774                                 
Name
(GenBank) DNA-directed RNA polymerase alpha chain
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
bado  Bifidobacterium adolescentis BBMN23
Pathway
bado03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bado00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BBMN23_0377
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bado03021]
    BBMN23_0377
   03400 DNA repair and recombination proteins [BR:bado03400]
    BBMN23_0377
Enzymes [BR:bado01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BBMN23_0377
Transcription machinery [BR:bado03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BBMN23_0377
DNA repair and recombination proteins [BR:bado03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BBMN23_0377
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L
Other DBs
NCBI-ProteinID: AJE05349
Position
452133..453131
AA seq 332 aa
MLIAQRPTLTEESLNPQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGVP
HEFTTLPGVEEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEATAGDITPPAGVTIAN
PDMHIATLAEDGELEIEFTVERGRGYVPAQMNKQDNAEIGRIPVDSIYSPVLKVSYRVEA
TRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNTQAEGVEVGPAPVA
EETNPEMNIPIEDLNLTQRSYNCLKREGIHTIGELVAHTEQDLLDIRNFGMKSIDEVKEK
LQSLGLALKASPLGNFDTNNLEGGTFFSPEDE
NT seq 999 nt   +upstreamnt  +downstreamnt
gtgcttatcgcacagcgtccgacacttaccgaggagtctctcaaccctcagcgttcccgc
ttcaccatcgagcctcttgagcctggtttcggctacacgcttggcaactcgctgcgccgt
accctcctgagctccattccgggagcggctgtgacttcggtgcgtatctccggcgtcccg
cacgagttcaccactctgccgggtgttgaagaggacgttaccgaaatcctgctgaacatc
aagggcatcgtgctcaccagcgaatacgatgagccggttgtcatgtatctgcgcaagagc
ggcaagggcgaggccaccgcgggcgacatcaccccgccggccggcgtcaccatcgccaac
ccggacatgcatatcgctaccctcgccgaggatggcgaactcgagatcgagttcaccgtc
gagcgtggccgcggctatgtgcccgcccagatgaacaagcaggataacgccgagatcggc
cgcattccggtcgactcgatctactccccggtgctcaaggtgagctatcgtgtggaagcc
acccgcgttgaacagcgcactgacttcgacaagctcatcctggacgtggagaccaagccg
gctatctccccgcgcgatgcagtcgcatccgcaggctccaccctggtggaactcttcggc
ctgtgccgtgagctcaacacccaggctgagggcgtcgaggttggccctgctcctgtggca
gaggaaaccaacccggagatgaacatcccgatcgaggacctgaacctcacccagcgcagc
tacaactgcctgaagcgcgagggcatccacacgatcggcgagctggtcgcccacaccgag
caggatctgctcgatatccgcaatttcggtatgaagtccatcgatgaagtcaaggagaag
ctccagtctctgggactcgccctcaaggcttccccgctgggtaacttcgataccaataat
ctcgaaggtggcaccttcttctcgccggaagacgagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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