KEGG   Bacillus atrophaeus: BATR1942_21030
Entry
BATR1942_21030    CDS       T01339                                 
Name
(GenBank) ATP-dependent RNA helicase; cold shock
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
bae  Bacillus atrophaeus
Pathway
bae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BATR1942_21030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bae03019]
    BATR1942_21030
   03009 Ribosome biogenesis [BR:bae03009]
    BATR1942_21030
Enzymes [BR:bae01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     BATR1942_21030
Messenger RNA biogenesis [BR:bae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BATR1942_21030
Ribosome biogenesis [BR:bae03009]
 Prokaryotic type
  rRNA helicases
   BATR1942_21030
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_RecD AAA_19 CMS1 AAA_22
Other DBs
NCBI-ProteinID: ADP35121
UniProt: A0A0H3E7D6
Position
4148167..4149660
AA seq 497 aa
MTITFQDFQLSSDLMKAINRLGFEEATPIQAETIPLGLQHKDVIGQAQTGTGKTAAFGIP
LVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKK
NPHIIVGTPGRLLDHINRRTLRLNNVNTVVMDEADEMLNMGFIEDIESILSNVPSEHQTL
LFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQS
PELAIVFGRTKRRVDELSEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDV
AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTT
KRKMDRMKEPTLDEAIEGQQQVTVDRLRTIISENNLNFYMTAAAELLEDHDAVTVVAAAI
KMSTKEPDDTPVRLTDEAPMVGKRHRNHRSSKRRDGGGGQGGGYRGKSKSNSRSSYDKKR
SSNDRRPSGERRQKKSF
NT seq 1494 nt   +upstreamnt  +downstreamnt
ttgactataacgtttcaagattttcaattaagttctgatctcatgaaagctataaatcgc
ttgggattcgaagaagcaacaccgattcaggcagaaacgattccgctcggacttcagcat
aaagatgtcattggacaagcgcaaacaggtacaggtaagacagctgcgtttggtataccc
cttgttgagaaaattaaccccgagtctcctaatatccaagcaattgtaatcgcgccaaca
cgtgaattagctattcaagtatctgaagaattatataaaatcggacaagataaacgtgcg
aaagttcttcctatttacggcggacaggatattggacgacaaatccgtgcgttaaagaaa
aacccgcatatcattgtcggtacgccggggcgtcttcttgaccacatcaaccgccgcaca
ctgcgtctgaacaacgtaaacacagttgttatggatgaagcggatgaaatgcttaacatg
ggattcatcgaggatatcgaatctattctttccaatgttcctagcgagcatcaaacgttg
cttttctctgctacaatgcctgcgccgatcaaacggatcgcagaacgcttcatgacaaat
ccggagcatgtaaaagtaaaagcaaaagaaatgacggtttcaaacatccagcagttctac
ttggaagtgcatgaacgtaaaaaattcgatacgttgactcgtttgcttgacatccagtct
cctgaacttgcgatcgttttcggccgcacaaaacgccgcgttgacgaattgtctgaagct
ttgaaccttcgcggatacacggctgaaggaattcacggcgacttgacgcaagctaaacgt
atggttgcgctccgtaagtttaaacaaggtgcgattgaagttcttgtggcgactgacgta
gctgcccgcggacttgatatctcaggtgtaactcacgtatataactttgacgtgcctcaa
gatcctgaaagctatgttcaccgtatcggaagaacaggccgtgcaggaaaaacaggtatg
gcgatgacatttatcacaccgcgtgaaaaagacatgcttcgtgcaattgagcaaacaacg
aagcgtaaaatggaccgcatgaaagagcctacacttgatgaagcaattgaaggacagcag
caggttactgttgaccgccttcgcacgatcatcagtgaaaacaacttgaacttctacatg
actgctgcagcagagctgttagaagatcatgacgcagtgacagttgtggcagcggcaatt
aaaatgtccacgaaagagcctgatgatacaccggttcgccttacagacgaagctccgatg
gtaggcaaacgccatagaaaccaccgctcttcaaaaagaagagatggcggcggcggacaa
ggcggcggctatcgcggaaaatcaaaaagcaacagccgttcttcctatgataaaaaacgt
tcgtctaacgaccgtcgtccttcaggggaaagacgccagaaaaaatcattttaa

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