KEGG   Borrelia afzelii (Maryland): BafPKo_0863
Entry
BafPKo_0863       CDS       T02093                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
bafz  Borrelia afzelii (Maryland)
Pathway
bafz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bafz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BafPKo_0863 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bafz03400]
    BafPKo_0863 (uvrB)
DNA repair and recombination proteins [BR:bafz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BafPKo_0863 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BafPKo_0863 (uvrB)
SSDB
Motif
Pfam: UvrB Helicase_C UvrB_inter ResIII UVR DEAD AAA_22 AAA_30 Viral_helicase1 DUF87
Other DBs
NCBI-ProteinID: AEL70052
UniProt: Q0SM15
Position
890499..892493
AA seq 664 aa
MIDFFLKSEYLPAGDQPKAIKEIENSILLGNKYQTLKGVTGSGKTFTIANIIKNLNRPAL
VVSHNKTLAAQLYREFKDFFPNNAVEYFVSYYDYYQPESYVPSKDLFIEKEATINSEIEI
KRIRTVTSLAKRRDVIVVATVSSIYALGSPDFFKKSAREFFVGQRISIKEISDIFVELYY
ERTLINLERDKFSIKGDIIEIWPSSEHGEFAYRICLDFDEIVKIYRISSFSKKNLGATNS
FTLFAKSYFVIPYQNVLEAIPKISYDLDLQCQYFKDNGKLVEAERLKQRVEYDLEMLRET
GFCSGIENYSKYLSGSTMGRPYCLFDFFPKDYLLFVDESHVTLPQFRGMYNGDYSRKLNL
VNFGFRLPAALENRPLKYDEFDALINQVVFVSATPGFEENEKSSVTVDQIIRPTGLVDPE
IITRHSDGQMEDLYIEIQKRVALKERVLITTLTKKMSEDLTEYLVTLGVKAKYLHSELDT
LERVEVISLLRKSEIDVIVGINLLREGLDIPEVSLVAILDADKVGFLRSATSLIQTIGRA
ARNSNGLVIMYYDKISVAMREAIEETNRRRQIQIDYNKKNNITPKTIVKKIQNILEKELN
NKNKNISYDFEKMVSGEKLSKKKLIDKLKFELEEAVNDERFEDAIVLRDKIKELGSKISV
ARNK
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgatagatttttttttgaaatcagaatatcttcccgctggtgatcagcctaaggcaata
aaagagattgaaaattctattttgctagggaataagtatcaaacattaaaaggtgttacg
gggagtggaaagacttttacaattgcaaatataattaaaaacttaaacagacctgcctta
gttgtaagtcataacaaaacattagcagcgcaactttatagagagtttaaagactttttt
ccaaacaatgctgttgaatattttgtttcttattatgattattatcagccagaatcctat
gtgccttcaaaggatttatttattgaaaaagaagctactattaattctgagatagaaatt
aagcgaataagaacggtaacgtctcttgctaaaagacgagatgttattgttgttgcaact
gtatcttcaatttatgctcttggatctccagattttttcaaaaaatcagcgcgagaattt
tttgtaggtcaaagaatttctattaaagaaatatcagatatttttgtagagctttattat
gagagaactttgataaatctagaaagagataaattttcaattaagggagatattattgaa
atttggccaagcagtgagcatggagagtttgcgtatcgaatttgtttggattttgatgag
attgttaaaatatataggattagttcattttctaaaaaaaatttaggagctacgaatagt
tttactctttttgctaaatcttattttgtaattccttatcaaaacgtattagaagcgata
cctaaaatatcttatgatttagatctccaatgtcaatattttaaagataatggcaagctt
gtagaagccgagagacttaagcagagggtggagtatgatttggaaatgcttagagaaaca
ggattttgctctggcattgaaaattattctaaatatttgagtggaagcacaatgggaaga
ccttattgtctttttgattttttcccaaaagattacttattgtttgtagatgaatctcat
gttacattgccacaatttagggggatgtataatggagattattctagaaaattgaatctt
gttaacttcggatttagacttcctgcagcgcttgaaaatagaccccttaagtatgatgaa
tttgacgcattaattaatcaggttgtgtttgtatctgcaactccaggttttgaagagaat
gaaaagagtagtgtgactgttgatcaaataattcgtcccacaggccttgttgatcctgaa
attattactaggcattctgatgggcaaatggaagatctttatatcgagattcaaaaaaga
gtagctcttaaagagcgggttttaattactactttgacaaaaaaaatgtctgaggatttg
actgaatatttagtaactcttggtgtaaaggcaaaatatttacattcagagcttgacact
cttgaaagagtagaagttatttcattgcttagaaaatctgaaattgatgttattgttggt
attaacttgcttagggaaggcttagatattccagaagtatctcttgttgcaatattagat
gccgataaagtagggtttttaagatctgctacttcattaatacaaacaattggcagggct
gctagaaattctaatggacttgtaataatgtattacgacaaaataagtgtagctatgcgg
gaggcaattgaggagactaatagaagacgtcaaattcagattgattataataaaaaaaat
aatattactcctaagacaattgttaagaagattcaaaatattttagaaaaagaactaaat
aacaaaaataaaaatattagctatgactttgaaaaaatggtttcaggtgagaaattgtct
aaaaaaaagcttattgataagcttaaatttgaactagaagaagctgttaatgatgaaaga
tttgaagatgcaattgttttaagagataaaataaaagagcttggtagcaaaattagtgtg
gctcgtaataaatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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