KEGG   Burkholderia ambifaria AMMD: Bamb_2012
Entry
Bamb_2012         CDS       T00398                                 
Name
(GenBank) Conjugal transfer protein TrbG/VirB9/CagX
  KO
K20532  type IV secretion system protein TrbG
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bam00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Bamb_2012
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bam02044]
    Bamb_2012
Secretion system [BR:bam02044]
 Type IV secretion system
  Trb secretion system protein
   Bamb_2012
SSDB
Motif
Pfam: CagX
Other DBs
NCBI-ProteinID: ABI87568
UniProt: Q0BE55
Position
1:2207996..2209000
AA seq 334 aa
MNLPFRFYAFVLMFAAITSSLLGCASQGKPPPSISLDEPVQAQPLPELPKPVEVVAVPEP
LALPAQLKPLPEVGEAAPVPEPADEKVRVSRANAEARIAPTREGYVNAIQVWPYSDGALY
QVYAAPGRVTVVSLQPGEELVTVAAGDTVRWIVGDTSSGSGEALRVNVLVKPTRSGLKTN
LVITTSRRTYLLELTSTEKAWMASASWDYPKDRMLALQRQSQAASAAAPVDTGLALEKIR
FRYAISGSNPPWKPQRAFDDGEKVYIQFPPGIAQGELPPLFVIGAQGDGQLVNYRFRSPY
YIVDRLFGAAELRLGGDGSDVVRIERTDGVARRN
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgaacttgcctttccgcttttacgctttcgtgctgatgttcgcggccatcacgtcgtca
ttgctgggctgcgcctcgcagggcaagccgccgccgtccatctcgctcgatgagccggtg
caggcccagccgttgcccgaactgcccaagccggtcgaagtcgtcgccgtgcccgagccg
ctggcgctgccggcgcagttgaagccgctgccggaggtgggcgaggcagcgcccgtgccc
gagccggccgacgagaaggtgcgcgtctcgcgcgccaatgccgaggcgcgcatcgcgccg
acccgcgagggctacgtcaacgcgattcaggtgtggccgtatagcgacggcgcgttgtat
caggtctatgccgcgccggggcgcgtcaccgtggtttcgctccagcccggcgaggaactt
gtcaccgtcgccgctggcgataccgtgcgctggatcgtcggcgacacgtccagcggcagc
ggcgaggcgctgcgcgtcaatgtgctggtcaagcccacccgctcgggcctgaagaccaat
ctggtcatcaccaccagccggcggacgtacttgctggaactgacctcaacggaaaaggca
tggatggcgtcggcgtcatgggactacccaaaagaccggatgctggccttgcagcgtcaa
tcgcaggcggccagcgccgccgcgccggtcgataccggcctggcactggagaagatccgc
ttccgctacgcgatcagcggcagcaatccgccgtggaagccgcagcgggccttcgatgat
ggcgagaaagtctatatccagttcccgccgggtatcgcccaaggcgaactgccgccgctg
ttcgtcattggcgcgcagggtgatggtcagctcgtcaactaccgtttccgttcgccgtac
tacatcgtggatcgcctctttggtgcggctgaactgcgcttgggcggcgatggtagtgac
gtggtgcggatcgagcgcacagacggcgtggcgcggaggaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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