KEGG   Burkholderia ambifaria AMMD: Bamb_2112
Entry
Bamb_2112         CDS       T00398                                 
Name
(GenBank) HhH-GPD family protein
  KO
K01247  DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Bamb_2112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bam03400]
    Bamb_2112
Enzymes [BR:bam01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     Bamb_2112
DNA repair and recombination proteins [BR:bam03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Bamb_2112
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-ProteinID: ABI87668
UniProt: Q0BDV5
Position
1:complement(2322326..2323189)
AA seq 287 aa
MATARKAPVRRATPVAARPAARRAPAAKTDATRAVPNGALNGHARPARAKGADAAQPEAA
MAAGDAARKVRASEAAADGADGVVRPAYWDKACADLVKRDRILKKLIPKFGPAHLVKRGD
PFVTLARSVVGQQISVPSAQALWARIEDACPKLAPQPVIRLGADKLIACGLSKRKTEYIL
DLAQHFVSGALHVDKWTSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGL
IRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDAPDAD
NT seq 864 nt   +upstreamnt  +downstreamnt
atggcaacggcaagaaaagcgccggtcaggcgcgcgaccccggtcgccgcgcgtccggca
gccaggcgcgcgccggcggcgaaaacggacgcgacgcgcgccgtgccgaacggcgcgctc
aacggtcatgcgaggcctgcgcgcgcgaagggcgcggacgctgcacagccggaggccgcg
atggcggccggcgacgcggcgcgcaaggtgcgtgcatccgaggcggcggccgacggcgcc
gatggcgtcgtgcgtcccgcgtactgggacaaggcgtgcgccgatctcgtcaagcgcgac
cgcatcctgaagaaactgatcccgaagttcggtcccgcgcatctcgtgaagcgtggcgac
ccgttcgtcacgctcgcgcgttcggtggtcggccagcagatctcggtgccgtccgcgcag
gcgctgtgggcacgcatcgaggatgcgtgtccgaaactcgcgccgcagccggtcatccgg
ctcggcgcggacaagctgatcgcatgcgggctgtcgaagcgcaagacggaatacattctc
gatctcgcgcagcacttcgtgtccggcgcgctgcacgtcgacaaatggacgtcgatggac
gacgaggacgtgatcgcggaactcacgcagatccgcggcatcagtcgctggacggccgag
atgttcctgatcttcaacctgtcgcggccggacgtgctgccgctcgacgatccgggtctg
atccgcgcgatcagcgtcaattacttcagcggggagcccgtgacgcgcagcgaggcgcgc
gaggtggccgccaactgggagccgtggcgtaccgtcgcgacctggtacatgtggcgcagc
ctcgacgcgcccgacgccgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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