KEGG   Burkholderia ambifaria AMMD: Bamb_3160
Entry
Bamb_3160         CDS       T00398                                 
Name
(GenBank) exodeoxyribonuclease III Xth
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Bamb_3160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bam03400]
    Bamb_3160
Enzymes [BR:bam01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     Bamb_3160
DNA repair and recombination proteins [BR:bam03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     Bamb_3160
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: ABI88716
UniProt: Q0BAV7
Position
1:complement(3493379..3494152)
AA seq 257 aa
MMRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPADFVEPHGLRSYFHH
AEKKGYSGAGMYSRHEPDDVIIGFGSSEFDPEGRYVEARYGKLSVVSVYVPSGSSGEERQ
QAKYRFMDEFMPHLAELKSKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEERAWLTQ
LFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKRTSIFKD
IKFSDHAPLTVDYDYKK
NT seq 774 nt   +upstreamnt  +downstreamnt
atgatgcgagtgattaccgccaacctgaacggcatccgctccgccgcgaagaagggcttt
tttgaatggctcggcgaacagaatgccgactgcgtgtgcgtgcaggaaatcaaggtatcg
gccgacgacctgccggccgacttcgtcgagccgcatggcttgcggagctatttccaccac
gccgagaagaagggctacagtggcgcgggcatgtacagccgccacgagcccgatgacgtg
atcatcggcttcggcagcagcgaattcgatcccgagggacgctacgtcgaggcgcgctac
ggcaagctgtcggtcgtgtccgtgtacgtgccgtccggctcgagcggcgaagagcgtcag
caggcgaagtaccgcttcatggacgagttcatgccgcatctcgccgagctgaagagcaag
cgcgaggtgatcctgtgcggcgacgtgaacatcgtccacaaggaaatcgacatcaagaac
tggaagagcaaccagaagaactcgggctgcctgccggaagaacgcgcatggctcacgcag
ctgttcgacgatgtcggctatgtcgacgtattccgcacgctcgacccgcgccccgagcag
tacacgtggtggagcaaccgtggccaggcttacgcgaagaacgtcgggtggcggatcgat
taccagatcgcgacgccgggcgtggccggcaccgcgaagcgcacgtcgatcttcaaggac
atcaagttcagcgatcacgcgccgctgacggtcgattacgactacaagaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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