KEGG   Burkholderia ambifaria AMMD: Bamb_4116
Entry
Bamb_4116         CDS       T00398                                 
Name
(GenBank) transcriptional regulator, LuxR family
  KO
K19666  LuxR family transcriptional regulator, quorum-sensing system regulator SolR
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam02020  Two-component system
bam02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Bamb_4116
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Bamb_4116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bam03000]
    Bamb_4116
Transcription factors [BR:bam03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    Bamb_4116
SSDB
Motif
Pfam: Autoind_bind GerE Sigma70_r4 Sigma70_r4_2 HTH_23 HTH_20 HTH_38 HTH_11
Other DBs
NCBI-ProteinID: ABI89669
UniProt: Q0B854
Position
2:complement(1038825..1039544)
AA seq 239 aa
MELRWQDAYQQFSAAEDEQQLFQRIAAYSKRLGFEYCCYGIRVPLPVSKPAVAIFNTYPD
GWMARYQAQNYIEIDSTVRDGAMSTNMIVWPDVDRIDPCPLWQDARDYGLSVGVAQSSWA
ARGAFGLLSIARHADRLTPAEINMLTLQTNWLANLSHSLMSRFMLPKLSPESSVTLTARE
REVLRWTAEGKTACEIGQILSISERTVNFHVNNILEKLGATNKVQAVVKAIGAGLIDTP
NT seq 720 nt   +upstreamnt  +downstreamnt
atggaattacgctggcaggatgcctaccaacaattcagtgccgcggaagacgagcagcag
ctcttccagcggatcgctgcctattctaaacgcctcggcttcgaatattgctgttacggc
attcgcgtgccgctgcccgtatcgaagccggccgtcgcgatcttcaatacctatccggac
ggctggatggcgcgctaccaggcgcagaactacatcgagatcgattcgacggttcgcgac
ggcgcgatgagcaccaacatgatcgtgtggccggacgtcgaccggatcgacccgtgcccg
ttgtggcaggacgcgcgcgactacgggctgtcggtgggcgttgcgcagtcgagctgggcg
gcgcgcggcgcgttcgggctgctgagcatcgcccgtcatgcggaccggctcacgccagcc
gagatcaacatgctgacgctgcagacaaactggctcgcgaacctgtcgcattcgctgatg
agccgcttcatgctgccgaagctgtcgccggagtcgagcgtcacgctgaccgcacgcgag
cgcgaggtgctgcgctggacggccgaaggcaagaccgcgtgcgagatcggccagatcctc
agcatctcggagcgcacggtcaatttccacgtgaacaacatcctcgagaagctcggcgcg
acgaacaaggtccaggcggtcgtcaaggcgatcggggcgggactcatcgacacgccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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