KEGG   Burkholderia ambifaria AMMD: Bamb_5084
Entry
Bamb_5084         CDS       T00398                                 
Name
(GenBank) DNA damage-inducible DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
bam  Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:bam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bam03400]
    Bamb_5084
Enzymes [BR:bam01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Bamb_5084
DNA repair and recombination proteins [BR:bam03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Bamb_5084
SSDB
Motif
Pfam: DNA_pol_B DNApolII_N DNA_pol_B_exo1 DNA_pol_B_2
Other DBs
NCBI-ProteinID: ABI90633
UniProt: Q0B5E0
Position
2:complement(2107782..2110148)
AA seq 788 aa
MTEFEQGFILTRHWRDTASGIEIEFWLATEHGPRRVRLRPQEAVAFVPAEQQALAERTLA
GERDAELRPLALRDFRQRAVAGLYCRRYRNLSGLQKRLAAAGIDVYEADIQPPDRYTMER
FITAPVLFRGTAGRDGTLTDGELKPATGYRPTLRCVSLDIETSVHGELYSIALEGCGQRQ
VYRLGPPNGDAPAVDFNLDYCDNRAEMLMRLNDWFGAHDPDAVIGWNVVQFDLRILHAHA
EQYGVPLKLGRGGSVLEWRAHGQQPDHFFAGAAGRLILDGIDMLKSATWSFPSFSLEYVS
QSLLGEGKAVDNPYQRMDEIQRRFDHDKPALAHYNLKDCELVTRIFEKADLLSFALERAS
VTGLAADRTGGSVAAFTHLYLPRMHRLGYVAPNLGDVTGQNSPGGFVMDSRPGLYDSVLV
FDYKSLYPSIIRTFLIDPVGLIEGLAHPSDDASVPGFLGARFSRTAHCLPDIVRRVSEGR
DEAKRQRNAPLSQALKIIMNSFYGVLGSTGCRFFDPRLASSITMRGHEIMHRTRELIEAQ
GYEVIYGDTDSTFVWLGREHDDDAAATKGRALVEQVNRWWQTHLRDRFGLESALELQYER
HYRRFLMPTVRGAEEGSKKRYAGLAVAANGDEDLVFKGLETVRTDWTPLAQLFQRELYRR
VFKREPYQDFIRDYVRRTLAGEYDAQLIYRKRVRRPLSEYQRNVPPHVRAARIADEFNQA
RGRPLQYQRGGWISYVMTTAGPEPLETMRSPIDYAFYVSRQLQPVADAILPFLRDDFERV
ISGQGQLF
NT seq 2367 nt   +upstreamnt  +downstreamnt
ttgacggagttcgagcagggtttcatcctcacccgccactggcgggacacagcgtccggc
atcgagatcgagttctggctggcaaccgaacacggcccgcgccgcgtgcggttgcgcccg
caggaagccgtcgcgttcgtgccggccgagcagcaggcgctcgccgaacgcacgctggcc
ggcgaacgtgatgccgaactgcgcccgctcgcgttgcgcgacttccgccagcgcgccgtc
gccggcctctattgccgccgctaccgcaatctgtccgggctccagaaacgcctcgccgcg
gccggcatcgacgtctacgaagccgacatccagccgcccgaccgctacacgatggagcgc
ttcatcacggcgcccgtgctgtttcgcggcacggccggccgcgacggcacgctgaccgac
ggcgaactgaaacccgcgaccggctatcgcccgacgctgcgctgcgtgtcgctcgacatc
gagacgagcgtccacggcgagctgtattcgatcgcgctcgaaggctgcgggcagcggcag
gtctacaggctcgggccgcccaacggcgacgcgccggccgtcgacttcaacctcgactac
tgcgacaaccgggccgagatgctcatgcggctcaacgactggttcggcgcgcacgatccc
gatgcggtgatcggctggaacgtcgtgcagttcgacctgcgcatcctgcatgcgcacgcg
gagcaatacggcgtgccgctgaagctcgggcgcggcggcagcgtgctcgagtggcgcgca
catggtcaacagcccgaccacttcttcgcgggggcggccggccgcctgatcctcgacggt
atcgacatgctgaaatcggcaacgtggtcgttcccgtcgttcagcctcgaatacgtgtcg
cagtcgctgctcggcgaaggcaaggctgtcgacaatccgtatcagcggatggacgagatc
cagcgccgcttcgatcacgacaagcccgcgctcgcgcactacaacctgaaggactgcgaa
ctcgtcacgcgcatcttcgagaaggccgacctgctgtccttcgcgctcgaacgcgcgagc
gtcacgggcctcgcggccgatcgcaccggcggctcggtcgccgcgttcacgcacctgtac
ctgccgcgcatgcaccggctcggctacgtcgcgccgaacctcggcgacgtaaccgggcag
aacagccccggcggcttcgtgatggattcgcggcccgggctgtacgattcggtgctcgtg
ttcgactacaagagcctctatccgtcgatcatccgcacgttcctgatcgatccggtcggg
ctgatcgaagggctcgcgcacccgagcgacgacgcgtcggtgccgggctttctcggcgcg
cgcttctcgcgtaccgcgcattgcctgcccgacatcgtgcggcgcgtgtccgaaggccgt
gacgaagcgaaacgccagcgcaacgcgccgctgtcgcaggcgctgaagatcatcatgaat
tcgttctacggcgtgctcggctcgacgggctgccggtttttcgatccgcgcctcgcgtcg
tcgatcacgatgcgcggccacgagatcatgcatcgcacgcgcgagctgatcgaagcgcag
ggctacgaagtcatctacggcgacaccgattcgactttcgtgtggctcgggcgcgagcac
gacgacgatgcggccgccaccaagggccgcgcgctcgtcgagcaggtgaaccgctggtgg
caaacgcacctgcgcgatcgcttcgggctggaaagcgcgctcgaactgcaatacgagcgg
cattaccgccgcttcctgatgccgaccgtgcgcggcgcggaggaaggcagcaagaagcgc
tatgcgggcctcgcggtcgcggcgaatggcgacgaggacctcgtgttcaaggggctcgaa
acggtgcgcaccgactggacgccgctcgcgcagctattccagcgcgagctctaccggcgc
gtgttcaagcgcgagccgtaccaggacttcattcgcgattacgtgcgccgcacgctcgcc
ggcgaatacgatgcacaactgatctatcggaagcgcgtgcgccggccgttgagcgaatat
cagcgcaacgtgccgccgcatgtgcgcgccgcgcggatcgccgacgaattcaaccaggcg
cgcggccggccgctgcagtaccagcgcggcggctggatcagctacgtgatgacgacggcc
ggcccggaaccgctcgagacgatgcgctcgccgatcgactacgcgttctatgtgagccgc
cagttgcaaccggtggctgatgcgatcctgccgtttctgcgcgacgatttcgaacgcgtg
atttcggggcaagggcagttgttttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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