KEGG   Burkholderia ambifaria AMMD: Bamb_5611
Entry
Bamb_5611         CDS       T00398                                 
Name
(GenBank) Ku domain protein
  KO
K10979  DNA end-binding protein Ku
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Bamb_5611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bam03400]
    Bamb_5611
DNA repair and recombination proteins [BR:bam03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Bamb_5611
SSDB
Motif
Pfam: Ku Luciferase_N Pol_alpha_B_N DUF3284
Other DBs
NCBI-ProteinID: ABI91158
UniProt: Q0B3W5
Position
3:complement(47129..48136)
AA seq 335 aa
MAPRMIWKGAISFGLVHVPVQLFPATRTVKPSFRLLDKRSMDPVGYRQINKRTGKEVTRE
DIVRGYEYEKERYVVLTDEEIRAANPESTQTVDILTFVDADAVSFLYLDTPYYLVPDRKG
EKVYALLREALKDSGKIGIALVVMRDRQHLGALIPVGPLLALDTLRWQEELRPLDELSVP
TDDAKHAGVTARELTMAKKLIDDMAGKWTPDEYHDTFRDDILELVERKVRSGKIEEIEDR
PAQTGRAATNVVDLTELLKRSLKGGGGARASDLRDERAEEEAETSSPAGARRKAAAKSAS
KGAAVKSPAKRPAAKRAATGAHAAKKTAVRGKHAA
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggcaccgcggatgatatggaaaggcgcgatcagtttcgggctcgttcacgtgcccgtg
cagctgttcccggcgacacgcaccgtgaagccgtcgttccggctgctcgacaagcgctcg
atggatccggtcggctatcggcagatcaacaagcgcaccggcaaggaggtcacgcgcgag
gacatcgtgcgcggctacgagtacgagaaggagcgctacgttgtactgaccgatgaagag
attcgcgcggcgaaccccgaatcgacgcagacggtcgacattctcacgttcgtcgacgcg
gacgcggtgtcgttcctgtatctcgacacgccgtactacctcgtgccggaccgcaagggc
gagaaggtctatgcgctgctgcgcgaggcactgaaggacagcggcaagatcggcatcgcg
ctcgtcgtgatgcgcgaccgccagcatctcggcgcgctgattccggtcgggccgctgctc
gcgctcgacacgttgcgctggcaggaggaactgcgcccgctcgacgaactgtcggtgccg
acggacgacgcaaagcacgcgggcgtgaccgcgcgcgagctgacgatggcgaagaagctg
atcgacgacatggcgggcaagtggacgcccgacgagtatcacgacacgttccgcgacgac
atcctcgaactggtcgagcgcaaggtgcgctcgggcaagatcgaggaaatcgaggaccgg
ccggcgcagacgggccgtgccgcgaccaacgtggtcgacctcaccgagctgctcaagcgc
agcctgaagggcggcggtggcgcgcgcgcatcggacctgcgcgacgaacgcgcggaagag
gaggccgagacgtcgtcgcctgccggcgcgcgtcgcaaggcggctgcgaaatccgcgtcg
aaaggcgcggccgtgaagagtccggcgaagcggccggccgcgaaacgcgcggcgacgggc
gcacatgcggcgaagaaaaccgccgtgcgcggcaagcacgccgcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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