KEGG   Burkholderia ambifaria AMMD: Bamb_5759
Entry
Bamb_5759         CDS       T00398                                 
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam00260  Glycine, serine and threonine metabolism
bam00460  Cyanoamino acid metabolism
bam00630  Glyoxylate and dicarboxylate metabolism
bam00670  One carbon pool by folate
bam00680  Methane metabolism
bam01100  Metabolic pathways
bam01110  Biosynthesis of secondary metabolites
bam01120  Microbial metabolism in diverse environments
bam01200  Carbon metabolism
bam01230  Biosynthesis of amino acids
bam01240  Biosynthesis of cofactors
Module
bam_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:bam00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Bamb_5759
  09102 Energy metabolism
   00680 Methane metabolism
    Bamb_5759
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Bamb_5759
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    Bamb_5759
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Bamb_5759
Enzymes [BR:bam01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     Bamb_5759
SSDB
Motif
Pfam: SHMT DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: ABI91306
UniProt: Q0B3G7
Position
3:complement(221335..222630)
AA seq 431 aa
MNENARFFSETLQSRDPVIASEIALELRRQQSQIELIASENIASAAVLEAQGTVLTNKYA
EGYPSRRYSGGCDHVDRIESLAIDRACALFDAAHANVQPHSGAQANGAAMLALVKPGDTV
MGMSLDAGGHLTHGARPVLSGKWFNAVQYGVSPDTLRIDYDDVRRLAGRHRPKLIIAGYS
AYPRALDFAAFREIADSVDAKLMVDIAHFAGIVAAGRHQNPVPFADVVTSTTHNTLRGPR
GGFILTNHAELAKQIDAAVFPGLQGGPLMHVVAGKAVAFAEALRPEFARHIDRVLRNAQT
LASVLTAGGLSLVTGGTDNHLLLVDLRSRRMTGAQAEKALERAGITCNKSGIPFDTENPM
VTSGIRLGTPAGTTRGFGPAQFEQIGEMIVDVLAALERDPSGDQAVERSVRTRVRDLCSQ
FPIYAHAEAFA
NT seq 1296 nt   +upstreamnt  +downstreamnt
gtgaacgagaacgcccgctttttttccgaaacgctccagagccgggatccggtgatcgca
tcggagatcgcactggagctgcgtcgtcagcagagccagatcgaactgatcgcgtctgaa
aacatcgcgtcggcggcggtgctggaagcccaggggaccgtgctgacgaacaagtacgcg
gaaggctatccgtcccggcggtactccggcggctgcgaccatgtcgaccggatcgagtcg
ctcgcgatcgaccgcgcgtgcgcactgttcgacgccgcgcatgcgaacgtccagccgcac
tcgggcgcgcaggccaacggcgcggcgatgctcgcgctcgtcaagcccggtgacacggtg
atgggcatgtcgctcgacgcgggcggccatctcacgcacggcgcgcggccggtgctgtcg
gggaagtggttcaacgcggtgcagtacggcgtgagcccggacacgctgcgcatcgattac
gacgacgtgcgccggctcgccgggcggcatcgtccgaaactgatcatcgctggttactcg
gcgtatccgcgtgcgctcgacttcgccgcgttccgcgagatcgcggacagcgtcgatgcg
aagctgatggtcgacatcgcgcatttcgccggcatcgtcgcggccggccggcatcagaat
ccggtgccgttcgccgacgtcgtgacgtccactacgcacaatacgctgcgcggcccgcgc
ggcggcttcatcctgacgaaccatgccgagctcgcgaagcagatcgatgcggcggtattt
ccggggttgcagggcggcccgctgatgcatgtcgtcgccggcaaggccgtggcgttcgcc
gaggcgctgcgcccggagttcgcccgccatatcgaccgggtgttgcgcaacgcgcagacg
ctcgccagcgtgctgacggccggtggcctctcgctcgtcacgggcggcaccgacaaccat
ctgctgctggtcgacctgcgttcgcggcgcatgaccggcgcgcaagccgagaaggcgctg
gagcgcgccggcatcacctgcaacaagagcgggattccgttcgatacggaaaacccgatg
gtcacgtccggcatccggctcggcacgccggccggcaccacgcgcggcttcgggcccgcg
cagttcgagcagatcggcgaaatgatcgtcgacgtgctggcggcgctcgagcgcgatccg
agtggcgaccaggcggtcgaacggtcggtgcggacccgcgtgcgcgacctgtgcagccag
ttccccatttacgcacatgcggaggcgttcgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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