KEGG   Bacillus velezensis UCMB5033: RBAU_2988
Entry
RBAU_2988         CDS       T02795                                 
Symbol
pbpD
Name
(GenBank) penicillin-binding protein 4
  KO
K18770  penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
Organism
bama  Bacillus velezensis UCMB5033
Pathway
bama00550  Peptidoglycan biosynthesis
bama01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bama00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RBAU_2988 (pbpD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:bama01003]
    RBAU_2988 (pbpD)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bama01011]
    RBAU_2988 (pbpD)
Enzymes [BR:bama01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     RBAU_2988 (pbpD)
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     RBAU_2988 (pbpD)
Glycosyltransferases [BR:bama01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   RBAU_2988 (pbpD)
Peptidoglycan biosynthesis and degradation proteins [BR:bama01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   RBAU_2988 (pbpD)
SSDB
Motif
Pfam: Transgly Transpeptidase
Other DBs
NCBI-ProteinID: CDG30954
Position
3127213..3129087
AA seq 624 aa
MTMVRKIIGWILLLGIIPLCAFTVIASGKEVKQIKPFDQVLDKHIDLKAINLVQNSYMYD
RDGSLVSEIVSDHENRVIVPFNKIPNEVKQLFLTSEDRHFYEHKGFDFMGMVRAAASNFK
DHKIDQGASTITQQLARNVYLSHERTFSRKLTELAYSYQLEKKYSKDEILEGYLNTIYFN
NGVYGVGSAAQFYFSKPLKSLTLGEMAFICAIPNNPTLYDPLKHFDYTKKRQVRLLNGLK
KAGVISGKQLKKAEKEKIKLDINEKTNKYPDYVSYVNDEFTQLVSSSEGYDKRLEKASGK
AKQKIQSELSDRVSTLLKDGVKIYTALNPYMQNQVVAQVNQNLPYAGVQGGAAVINHQTH
QIIALSGGKDYHKYDFNRAYQAYRQPGSSIKPLLDYGPYIEKTGATPHSKIDASKFCSAD
YCPQNYNNRTYGTVTLETAFKYSYNTPAIRIMDRVGVNKAFSYLEPFHFAKLVSADYRLP
AALGGFTNGMTPLEMTNAYTTFGNNGVYTPSHAITKVTDLKGKTILKWKDEPTQVFSVRT
NMQIKEMMKAVVKSGTGKKANFKAPYVGGKSGTSNDYHDMWFVGLTDAYTMGVWVGKDTP
SSVEYLHDASPQLSIWKNTLQAAY
NT seq 1875 nt   +upstreamnt  +downstreamnt
gtgaccatggtacgtaaaataatcggatggattttgctgctcggcattatcccgttgtgt
gcatttacagttattgcttccggcaaagaggtaaaacaaatcaagccttttgatcaggtg
ctcgataaacatattgatttaaaagcgatcaacctggttcaaaacagttacatgtatgac
agggacggaagccttgtttctgagattgtcagcgatcatgagaaccgcgtgatcgtgccc
tttaataaaataccgaatgaggtaaaacaactgtttttaacctctgaagaccgtcatttt
tatgagcataaagggtttgactttatggggatggtcagggcggccgcctccaatttcaaa
gatcataaaattgatcagggcgccagcaccatcacccagcagctggcaaggaatgtgtat
ttaagccatgaacgcaccttcagccgaaaactgacggagctggcctattcctatcagctt
gagaaaaaatacagcaaagatgagattttagaaggctacttaaatacgatttattttaat
aacggcgtatacggtgtcggttcggcggcacaattttatttcagcaagccgctgaaatct
ctcactttgggagaaatggcctttatctgcgccatccctaataaccctacattatatgat
cctctcaagcattttgattatacgaaaaaacgacaagtcagattgcttaacggattaaaa
aaagcaggcgttatatccgggaaacagctgaaaaaagccgaaaaggaaaagatcaagctt
gatataaacgaaaaaacaaataaatatcctgactatgtttcctatgtaaatgatgaattc
acacagcttgtttcatcatccgaaggctatgacaaacgtcttgaaaaagcttccggaaag
gcgaaacaaaaaatacagagtgagctttcagacagagtcagcacattgttaaaagacggc
gtgaagatttatacggcgctgaatccgtatatgcaaaaccaggtcgtcgcccaagtgaat
caaaatctgccgtatgcaggcgtccagggcggagcggccgtgattaatcatcagacacat
cagattatcgcgctttcaggcgggaaagattatcataaatatgatttcaaccgtgcctat
caggcatacagacagcccggttcatccattaagccgctgcttgattacggaccttacatt
gaaaagaccggcgcaacgccacacagcaagattgacgcaagcaaattctgcagtgcggat
tactgcccgcaaaactacaataaccgcacgtacggtacggtcacgctggaaacggcgttt
aaatactcgtacaacacaccggccatcagaatcatggaccgcgtcggcgtcaataaggcg
ttcagctaccttgaaccgtttcatttcgcgaagctggtcagcgcggattaccgtctgcct
gcggcgcttggcggttttacaaacggcatgacgccgcttgaaatgaccaatgcgtacacc
acgttcggcaacaacggcgtttatacgccgagtcacgcgattacaaaagtgactgattta
aaaggaaaaacgatattaaaatggaaagatgagccgacgcaggtattcagcgtgcggacc
aacatgcagatcaaagaaatgatgaaagccgtcgtcaaaagcggaacaggaaaaaaagcg
aactttaaagctccgtacgtcggcggaaaatcaggaacgtcaaatgactatcacgatatg
tggtttgtcggcctgacggacgcttatacgatgggggtatgggtcggcaaggatacaccg
tcaagcgtcgaataccttcatgacgcaagccctcagctttcgatctggaaaaacacgctg
caggcagcttattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system