KEGG   Bacillus amyloliquefaciens CC178: U471_27160
Entry
U471_27160        CDS       T02893                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bamc  Bacillus amyloliquefaciens CC178
Pathway
bamc03030  DNA replication
bamc03410  Base excision repair
bamc03420  Nucleotide excision repair
bamc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bamc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    U471_27160
   03410 Base excision repair
    U471_27160
   03420 Nucleotide excision repair
    U471_27160
   03440 Homologous recombination
    U471_27160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bamc03032]
    U471_27160
   03400 DNA repair and recombination proteins [BR:bamc03400]
    U471_27160
Enzymes [BR:bamc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     U471_27160
DNA replication proteins [BR:bamc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     U471_27160
DNA repair and recombination proteins [BR:bamc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     U471_27160
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     U471_27160
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 HHH_2 HHH
Other DBs
NCBI-ProteinID: AGZ57414
Position
complement(2732932..2735571)
AA seq 879 aa
MTERKKLVLVDGNSLAYRAFFALPLLSNEKGIHTNAVYGFAMILMKMLEDEKPTHMLVAF
DAGKTTFRHSTFKEYKGGRQKTPPELSEQMPFIRELLDAYKISRYELPEYEADDIIGTLA
VSAEKEGFEVKVVSGDKDLTQLATGKTTVAITRKGITDVEDYTPEHVQEKYGLTPLQIID
MKGLMGDSSDNIPGVPGVGEKTAIKLLKQFHSVEKLLDSIDEVSGKKLKEKLEEYKEQAL
MSKELATIMTNAPIEVKPEDLDYKGFDREQVVAIFKDLGFNTLLERLGEESGETAEENFE
DINVETAEEITEDMLVSPSALVVEQIGDNYHEEPILGFSIVNETGLYYIPKEIAIQSETF
KSWAEDESMKKWVFDSKRSVVALRWQGIELKGTEFDALLAAYIINPGNSYDDVASVAKEY
GLNIVSKDEAVYGKGAKRAVPAEKELADHLARKASAVNSLRDKLLHALEENNQLELYEDL
ELPLALILGEMESMGVKVDVERLKRMGEELKAKLKEYEEKIHDIAGEPFNINSPKQLGVI
LFEKLGLPPVKKTKTGYSTSADVLEKLADKHDIVAHILQYRQIGKLQSTYIEGLLKVTRK
DSHKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSEPDWLIFAADYSQI
ELRVLAHISKDENLIEAFTNDMDIHTKTAMDVFHVSEDEVTQAMRRQAKAVNFGIVYGIS
DYGLSQNLGITRKEAGAFIDRYLESFPGVKAYMEESVQEAKQKGYVTTLMQRRRYIPELT
SRNFNLRSFAERTAMNTPIQGSAADIIKKAMIDMAAELKEKNLKARLLLQVHDELIFEAP
KEEIEILEKLVPEVMEHALALDVPLKADYASGPSWYDAK
NT seq 2640 nt   +upstreamnt  +downstreamnt
atgacggaacgaaaaaaattagtgcttgtcgacggaaacagtctggcgtaccgagcgttt
tttgcattgccgcttttaagcaatgaaaaaggcatccatacaaatgccgtatacgggttt
gcgatgattttaatgaaaatgctggaagatgaaaagccgacccacatgctggtggctttt
gatgcgggaaaaaccactttccgccacagtacgtttaaagaatataaaggcggaagacaa
aaaacgccgccggagctttcagaacagatgccgttcatccgcgagctccttgatgcctac
aaaatcagccgctacgagcttcctgaatatgaagcggacgatattatcggcacccttgcc
gtatctgctgaaaaagaaggtttcgaagtaaaggtagtgtcgggggacaaggacttaacc
cagcttgcaaccgggaaaacgaccgttgccattacgagaaaaggcattaccgacgtggaa
gattacacgccggagcacgtgcaagaaaagtacggtctgacccctttgcaaatcattgat
atgaagggattaatgggggattcatccgataacataccgggcgtccccggcgtcggagaa
aaaaccgcgattaagcttttaaagcagttccattcggttgagaaactgcttgattccatt
gatgaagtcagcggaaaaaaattaaaagaaaagcttgaagaatataaggaacaagccctg
atgagcaaagagctggcgacgattatgacaaatgcgccgattgaagtcaagcccgaagat
ttagattacaaagggtttgaccgtgaacaagttgttgccatttttaaagacctcggtttt
aatacgcttcttgagcggctcggtgaagaaagcggcgaaacggcggaagaaaattttgaa
gacatcaatgttgaaacggcagaagaaatcactgaagatatgctcgtttcgccgtccgct
ttggttgttgaacaaatcggtgataactatcacgaagaaccgatcctcggcttttccatc
gtgaatgaaacaggtctttattatattccgaaagaaatcgccattcagtctgaaactttt
aaatcttgggctgaagatgaatcgatgaaaaagtgggtgttcgacagcaaacgttccgtc
gtcgctttgcgctggcagggaattgagctgaagggaacggaatttgacgcgcttcttgct
gcctacattataaacccgggcaattcgtacgacgatgtcgcgagcgtagcgaaagaatac
gggctgaatatcgtttcaaaagatgaagcggtatacggaaaaggcgcaaagcgcgccgtt
ccggctgaaaaagagcttgccgatcatctcgcgcggaaagcgtctgccgttaacagcctc
cgtgacaaactgctgcacgcgctggaagaaaataatcagcttgaattatatgaagatctc
gaactcccgcttgcgctaattctcggagaaatggaatcaatgggcgtcaaagtggatgtt
gaaagactgaagcgaatgggcgaagagctcaaggcaaagctgaaagaatatgaagaaaaa
atccatgacatcgccggtgagccgtttaacatcaattcaccaaaacagctcggcgtcatt
ctgtttgaaaagctcggcctgccgccagtaaagaaaacaaaaacaggctattccacttca
gctgatgtgcttgagaagctcgcagacaaacatgatatcgtcgcgcacattctgcaatac
agacaaatcggcaaactccaatcgacttatattgaagggctgctgaaagtcacgcgcaag
gattctcataaagtgcatacacgattcaatcaggcattgactcaaaccggacgcctcagc
tcaacggatccgaacctgcaaaatattccgatccggctggaggaagggcggaaaatccgt
caggctttcgtaccgtccgaaccggactggcttattttcgccgccgattattcacaaatt
gaattaagggtgcttgcgcatatttcaaaagatgaaaatctgatcgaagcgtttacgaat
gacatggacattcacacaaaaaccgccatggacgtatttcatgtcagtgaagatgaagtg
acacaagcgatgcgccgccaggcaaaggccgtcaatttcggcattgtttacggcatcagt
gattacgggctgtcacaaaacctcggcatcacccggaaagaagcgggcgcttttatagac
cgctatttggagagtttcccgggcgtcaaggcgtatatggaagaatcggtgcaggaagcg
aagcaaaaaggatatgtcacgacacttatgcagcgccgccgctatattcctgagctgacc
agccgcaacttcaacctgcggagctttgcggaacggacggccatgaatacgccgattcag
ggaagcgccgccgatattattaaaaaagccatgattgacatggcagctgagctgaaagaa
aaaaacctgaaggcgcgactgctgcttcaggtgcacgatgaattgatttttgaagcgcct
aaggaagaaattgaaatattagagaagctggttcctgaagtgatggagcatgctttggca
ttagacgtgccgctgaaggcggattatgcttcagggccgtcttggtacgatgcaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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