KEGG   Bacillus amyloliquefaciens LFB112: U722_00140
Entry
U722_00140        CDS       T02965                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bamf  Bacillus amyloliquefaciens LFB112
Pathway
bamf03030  DNA replication
bamf03430  Mismatch repair
bamf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bamf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    U722_00140
   03430 Mismatch repair
    U722_00140
   03440 Homologous recombination
    U722_00140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bamf03032]
    U722_00140
   03400 DNA repair and recombination proteins [BR:bamf03400]
    U722_00140
Enzymes [BR:bamf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     U722_00140
DNA replication proteins [BR:bamf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     U722_00140
DNA repair and recombination proteins [BR:bamf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     U722_00140
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 RuvB_N AAA_30 TIP49 AAA_assoc_2 AAA_16 AAA_5 AAA_22 AAA_19 DnaX_C Rad17 PIF1 DNA_pol3_delta_C Mg_chelatase AAA_7 AAA_28 AAA_24 AAA_14 DUF815 TsaE
Other DBs
NCBI-ProteinID: AHC40630
Position
28033..29724
AA seq 563 aa
MGYQALYRVFRPQQFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTGKTSAAKIFAK
AVNCEHAPVEEPCNECAACKGITNGSISDVIEIDAASNNGVDEIRDIRDKVKFAPSAVTY
KVYIIDEVHMLSIGAFNALLKTLEEPPAHCIFILATTEPHKIPLTIISRCQRFDFKRITS
KAIVGRMKTIVDAEQLKVEEGALDIIASAADGGMRDALSLLDQAVSFSGEELSVDDALLI
TGAVSQHYIGKLASALHRKQVSEALETLNELLQQGKDAAKLIEDMIFYFRDMLLYQAAPG
LEGVLEKVKVDETFRNLSGDIPAPALYEMIDILNKSHQEMKWTNHPRIFFEVAVVKICQT
AQQSAGDIPEVGMLMNKIQQLEQEVERLKTSGVKVQMESAPKEAPRPQKGGKSHYKAPVG
RIHEILKEATRPDLEQLKSSWGKLLAHLKQQNKVSHAALLNDSEPVAAAQKAFVLKFKYE
IHCKMVAEDNNGVRTNLEQILESMLGKRMDLIGVPEAQWGKIREEFLNDHQQESEGSNEP
AEEDPLIAEAKKLVGADLIEIKD
NT seq 1692 nt   +upstreamnt  +downstreamnt
gtgggttaccaagctttatatcgagtatttaggcctcagcagtttgaagatgtggtcgga
caggaacacattacgaaaacgctgcaaaatgcccttttgcaaaagaaattttctcatgca
tatctgttttctggaccgcggggaacgggaaaaaccagtgcagctaaaatatttgcgaaa
gcagtcaactgtgagcacgcccctgtagaagaaccgtgcaatgagtgcgcggcatgcaag
gggatcacaaatggctctatatcagatgtgattgaaatagatgcggcgtcgaataacggc
gtagacgaaatccgcgacatccgtgacaaagtaaaatttgccccgtcggccgttacttac
aaggtatatattatagatgaggtgcatatgctctctatcggcgcattcaatgcgcttctg
aaaacgctggaagaaccgccggcacattgcattttcatattagctacgactgagcctcat
aagattcctttaaccattatctccagatgtcagcgttttgacttcaaacggattacatcc
aaagcaattgtcggacgaatgaagacaatcgtcgatgcagagcagctgaaggtggaagaa
ggagcccttgatatcatagcgagtgctgcggacggaggaatgagggacgcgctgagcctg
ctcgatcaagctgtatcattcagcggcgaggagctgtcggtggatgacgctttgctcatt
accggagccgtttctcagcactatattggaaaactggcatctgctcttcaccgcaaacag
gtttccgaggcattggaaacactgaatgaattgctccagcaggggaaagatgcggccaaa
ctgattgaagatatgattttctatttcagggatatgctcttgtaccaggccgctcccggt
ttagaaggagtcctggagaaggtgaaggtcgatgaaacgtttcggaatctgagcggtgac
ataccggcccccgctttatatgagatgattgatatcctgaataaaagccatcaggaaatg
aagtggacgaaccacccaagaatcttttttgaagtggctgtcgtgaaaatatgccaaacg
gcacagcaatccgccggagacatccctgaggtcggcatgctgatgaataagatccagcag
cttgagcaggaagtagaaaggctgaaaacctccggtgtgaaggttcagatggaaagcgct
ccgaaagaagctccgcgtcctcaaaaaggcggaaaaagccattataaagccccggtcgga
agaattcatgagatattgaaggaagccacaagacctgatcttgaacagcttaaaagcagc
tggggcaagctgctggcacacctgaaacagcagaataaggtgtctcatgcggctcttttg
aatgacagtgaaccggtggccgctgctcaaaaggcatttgtgcttaaatttaaatacgaa
atccattgtaaaatggttgcagaagacaataacggagtccgtacgaatcttgaacagatt
ctcgaatcaatgctcgggaaaagaatggatttgattggcgttccggaagcacaatggggt
aaaataagagaagaatttttaaatgatcaccagcaggaaagtgaaggatcaaacgaaccg
gctgaagaagatccgctgattgcagaggcgaaaaaacttgtcggagcggatttaatcgaa
ataaaagactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system