KEGG   Bacillus amyloliquefaciens LFB112: U722_12330
Entry
U722_12330        CDS       T02965                                 
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
bamf  Bacillus amyloliquefaciens LFB112
Pathway
bamf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bamf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    U722_12330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bamf03400]
    U722_12330
Enzymes [BR:bamf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     U722_12330
DNA repair and recombination proteins [BR:bamf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     U722_12330
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon RecJ_OB Glyco_tran_WecG Ripply AAA_23 Baculo_PEP_C
Other DBs
NCBI-ProteinID: AHC42854
Position
complement(2478697..2480043)
AA seq 448 aa
MSEAAYVTVSALTKYIKRKFDVDPHLEDIWIKGELSNVKIHTRGHIYFTLKDEHARMQAV
MFQRQSSRLAFKPEDGMKVIVRGGISVYEPSGSYQLYAKEMQPDGVGALYLAYEELKKKL
AGEGLFDDRHKQAIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENA
SRSIVKRIEEANAQKMCDVLIVGRGGGSIEELWAFNEEIVARAIFASVIPIISAVGHETD
FTISDFVADIRAATPTGAAEIAVPHTTDLMERTKTAEVRLTRAMQQHISKKKERVQSLQS
SYAFRFPKRLYTQKEQQFDLLYQQFQSQLTGLTDRKQRQLERNTYRLTALHPETQLKQAK
KRYEERSNQLARSMNVQLKQLHSQFQTVLGKLNALSPLQVMERGYSLAYKDKELIKSVDQ
VEQNDTLEVKMTDGVLTCEVLQKRGERK
NT seq 1347 nt   +upstreamnt  +downstreamnt
gtgagtgaagcggcatatgtcacggtttccgcgctgaccaaatacattaaacgaaaattc
gatgtggaccctcatcttgaagacatttggattaagggtgagctctccaatgttaaaatt
catacgagaggccacatctattttacattaaaagatgagcatgcccgcatgcaggccgtc
atgtttcaaagacaaagttcgaggcttgcgtttaagcccgaggacggaatgaaggtcatc
gtaagaggcggcatttccgtctatgaaccgagcggaagctatcagctgtacgcgaaagaa
atgcagccggacggtgtgggggcgctctacttagcatatgaagaattaaagaaaaaactt
gccggcgaagggttgtttgatgaccggcataagcaggccatccccgcttttccggccacg
atcggggtcgtcacgtcaccgacgggagcagccgtcagagacgtcattaccacactcaaa
agaagatacccccttgtgaaagtcattgtgcttcccgcgctcgttcaaggtgaaaatgcc
agcagatcaattgtgaagcgcattgaagaagccaatgcacaaaaaatgtgtgacgtcctg
atcgtcggaaggggagggggctcgatcgaagaattgtgggcatttaacgaagaaatcgtg
gcccgggcgatttttgcttccgtcattccgattatatcagccgtcggacatgaaacggat
tttacaatcagtgatttcgtcgcggatatccgggcggcaacgccgacaggagcggcagaa
atcgccgtcccgcacacgacggacttaatggaacggacaaaaacggcggaagtccgcctg
acaagagcgatgcagcagcatatcagcaagaaaaaagaacgggttcaatcgctccagtca
tcctacgcgttccgttttccgaaacgattgtatacccaaaaggaacagcagtttgatctt
ttgtatcagcagttccaatcacagctcacagggcttacggacaggaaacaaaggcagctg
gagcggaatacgtacagattaacggcgctccaccctgaaacccagctgaaacaggcgaaa
aaacggtacgaggagcgctcaaatcagctcgcccgaagcatgaatgtccagctgaagcag
cttcattcgcagtttcagacggttcttggtaaactgaatgcattaagtccccttcaggtg
atggagagaggatacagtctggcctataaagataaagagctgatcaaaagcgttgatcaa
gtggaacaaaatgatacgcttgaagtaaagatgacagacggcgttctgacgtgtgaagta
ttgcaaaagagaggcgaacgaaaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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