KEGG   Bacillus velezensis AS43.3: B938_13995
Entry
B938_13995        CDS       T02382                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
bamp  Bacillus velezensis AS43.3
Brite
KEGG Orthology (KO) [BR:bamp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bamp03016]
    B938_13995
Enzymes [BR:bamp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     B938_13995
Transfer RNA biogenesis [BR:bamp03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    B938_13995
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: AFZ91809
Position
complement(2883980..2884531)
AA seq 183 aa
MKASLPHYFIGIPIPADIAEPIWEAAKKEPALSFKKWVHPHDYHITLIFLGAADEERLAK
LSSLLADAASAAQPFTVQFQHLDIFGDRRQPRVLHLEPERNELLFDLREKTKHAVLKAGF
QVEKRPYHPHMTMARKWAGDRPFPDDVPFESGRVQSAVSRFSLFQTHLDRSPKYEEIAQF
QLT
NT seq 552 nt   +upstreamnt  +downstreamnt
atgaaagcttcattgccgcattattttatcggcattccgattccggctgacattgctgaa
ccgatttgggaagcagccaaaaaggagccggcgttatcattcaaaaaatgggtgcacccg
catgactatcatattacactcatttttctcggagccgcggatgaagaacggcttgcgaaa
ttatcgtctctgctcgcagatgctgcgtcggcagcgcagccgtttaccgtacagtttcag
catctggatattttcggcgaccgcagacagccgagagtgcttcaccttgagcccgaacgg
aatgaactgctctttgatttgcgggaaaaaacaaaacatgctgttttgaaggccggtttt
caagtggaaaaacgcccgtatcaccctcatatgacgatggcgcggaagtgggcgggagac
cggccgtttcctgacgatgtgccgtttgaaagcggcagggtgcaaagtgccgtcagccgg
ttttccttgtttcagacccatcttgaccggtcgcctaaatacgaagaaatcgcacagttt
caattgacataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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