KEGG   Bartonella ancashensis: PU02_1097
Entry
PU02_1097         CDS       T04086                                 
Name
(GenBank) DNA-directed RNA polymerase beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
banc  Bartonella ancashensis
Pathway
banc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:banc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PU02_1097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:banc03021]
    PU02_1097
   03400 DNA repair and recombination proteins [BR:banc03400]
    PU02_1097
Enzymes [BR:banc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PU02_1097
Transcription machinery [BR:banc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PU02_1097
DNA repair and recombination proteins [BR:banc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PU02_1097
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 DUF4856
Other DBs
NCBI-ProteinID: ALE03911
UniProt: U3N9F2
Position
complement(1189220..1193368)
AA seq 1382 aa
MAQTLAMMSQFNGRKRVRKFFGKISEVAEMPNLIEVQKASYDQFLMIEEPEGGRPDEGLQ
AVFKSVFPISDFSGTAMLEFVRYEFDLPKFDVEECRQRDLTYAAPLKVVLRLIVFDIDED
TGLRDIKDIKEQGVYMGDMPLMTGNGTFVINGTERVIVSQMHRSPGVFFDHDKGKSHSSG
KFLFAARVIPYRGSWLDIEFDAKDIIYTRIDRRRKIPVTSLLMALGMDGSDILSTFYNKL
TYERFGDGWRIPYSVGRFKGIKLVSDLVDAESGEVVAEAGKKLTVRSAKLLEEKGLKVIK
ISEDDLLGSYLADDVVNYQTGEIHLEAGDEIDEKALKILLDVGVDTINVLDIDHMNVGAY
IRNTLKADKNESQQDALFDIYRVMRPGEPPTMDTAEAMFHSLFFDPERYDLSAVGRVKMN
SRMGLDCPDTVRVLRQEDILAVVKMLVDLRDGRGEVDDIDNLGNRRVRSVGELMENQYRV
GLLRMERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITH
KRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGF
IESPYRKIVGGKVTAEVVYLSAMEESKHYVAQANSSLDSEGRFTEEFVVCRHAGEVLMTP
RDHVDLMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLIRAEAPFVGTGMES
VVSRDSGAAIAAKRGGIVDQVDATRIVIRATKDLDPSKSGVDIYRLQKFQRSNQSTCINQ
RPLVHVGDRIEKGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSERIVSDDV
FTSIHIEEFEVAARDTKLGPEEVTRDIPNVAEEALRNLDESGIVYIGAEVQPGDILVGKI
TPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMS
IEREEIERLAKDRDDEQSILDRNVYARLSDMLMGKFAIGGPKGFSKGKKLDSSIMDSYPR
SQWWQFAVDDEKLQGEIEVLRNQYDASKEALQRRFMDKVEKVQRGDEMPPGVMKMVKVFV
AVKRKIQPGDKMAGRHGNKGVVSRILPVEDMPFLEDGTHADVVLNPLGVPSRMNVGQILE
THLGWACAGMGKKIGDLIDFYRETGDIIPLRQRIEDFIPDNGRNEPVRKYDDESLLKLAL
QMGKGVSIATPVFDGAHESDINMMLEDAGLDSSGQVTLYDGRTGEPFDRSVTVGYIYMLK
LHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVK
SDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELDDVREFTAQRALPET
ID
NT seq 4149 nt   +upstreamnt  +downstreamnt
atggctcagactctagcaatgatgtctcaatttaatggtcgtaaacgtgtacgtaaattt
tttggtaagatttctgaagtggcggaaatgccaaatcttattgaagttcagaaagcgtca
tacgatcaatttctcatgattgaagagccggaaggcgggcgtccagatgaaggtttacag
gctgtttttaagtcagtgtttccaatatcagatttttccggtaccgccatgcttgaattc
gtgcgctacgagttcgatttgccgaagtttgacgttgaagagtgtcgtcagcgtgatttg
acttatgcagctccactaaaggtagtactgcgtttgattgtttttgatattgatgaagat
acgggtttaagagacattaaggacatcaaggagcagggtgtctatatgggagacatgccg
ttgatgacgggtaacggtacttttgtcataaacggtacggagcgcgttatcgtttcacag
atgcaccgttctccaggtgtgttttttgaccacgataaaggaaaatctcactcatcagga
aaatttctttttgcagctcgtgtgataccttacaggggatcttggcttgatattgaattt
gatgcaaaggatatcatatatactcgcattgatcggcggcgtaagatcccagtaactagc
cttttgatggcattgggtatggatggatctgatatcctatcgaccttttataataagctt
acctatgagcggtttggagatgggtggcgcattccctattcagttggtcgctttaaggga
ataaagttagtctctgatctcgttgatgcagagagtggggaggttgttgctgaggctggt
aaaaaattaacggtccgtagtgcgaagcttttagaagaaaaaggcttaaaggtaatcaaa
atcagtgaagatgatttattaggatcttatttggcggatgatgttgtcaattatcaaaca
ggcgagattcatcttgaggccggtgatgaaattgatgaaaaagcattgaaaattttgttg
gatgttggtgttgatacaatcaatgttcttgatattgatcatatgaatgttggtgcatac
attcgcaataccttaaaagcagacaagaacgaaagccagcaggatgccttgtttgatatt
tatagagttatgcgtccaggtgagccacccacgatggatacggcagaggctatgttccat
tcgttgttttttgatcctgagcgttatgatctttctgcggttggtcgtgttaaaatgaat
tcacgtatgggactcgattgtccggatacggttcgtgttttgcgtcaagaggatattctg
gcagttgttaagatgctggttgatttgcgtgatggtcgcggcgaagttgatgatattgat
aaccttggtaatcgtcgcgtgcgatccgttggggagctgatggagaaccaataccgggtt
ggtttattgcgcatggaacgtgcgataaaagagcgcatgtcttcagttgagattgatact
gttatgccacaggatcttattaatgcgaaaccggctgctgcagctgttcgtgaatttttt
ggatcctcacaattgtcacagtttatggatcaaacaaatcctttatcagagattacgcat
aagcgacgcctttctgctcttggaccaggtggtttaactcgggagcgtgcaggttttgaa
gtgcgcgacgtgcatcctacgcattatggtcgtatctgtccaattgaaacccctgaaggt
ccgaatattggcttaataaattctctggcgacttttgcacgcgtcaataaatatggattc
attgaaagtccgtatcgtaaaattgttggtgggaaagtgacggcagaagttgtttatctt
tctgccatggaagagtcgaagcattatgtggctcaagctaattcttcattggattcagag
gggcgttttacggaggaatttgttgtttgtcgtcatgctggtgaagttttaatgacaccg
cgtgatcacgtagatttgatggatgtttcgccaaaacagttggtttcagttgctgcagct
cttattccgtttttggaaaatgatgatgcaaaccgtgcattgatggggtcgaatatgcaa
cgtcaagctgttccccttattcgtgctgaagctccttttgttggcaccggtatggagtct
gtagtttctcgtgattcaggtgctgctattgctgcaaaacggggcggtatcgttgatcaa
gttgatgcgacgcgtattgttattcgcgcaacaaaggatttagatccttcaaaatctggc
gttgatatttaccgtttacaaaaatttcaacgttctaatcaatctacatgtatcaatcaa
cgccctcttgttcacgttggtgataggatagaaaagggtgatattatagctgacggtcca
tcgacagatctcggtgatttggctcttggtaggaatgttctggtggcatttatgccttgg
aatggttacaactacgaggattctatactactttcagagcgtattgtatctgatgacgtt
tttacttcgattcatattgaagaatttgaggttgctgcgcgtgatacaaagcttggacca
gaggaagttactcgtgatattcctaatgttgcagaggaagctttaaggaatcttgacgag
tcaggtattgtttacattggtgctgaagttcaacctggtgatattcttgtcggtaagatt
acgccaaagggtgaaagtcctatgacgccggaagaaaaacttttgcgtgcgatctttggt
gaaaaagcttcagatgttcgtgatacttcgatgagaatgcctccaggaactttcgggact
gttgtggaagttcgtgtttttaatcgtcatggtgtagaaaaagacgagcgggctatgtct
atcgagcgtgaagaaattgaacgtctggccaaagatagggatgatgagcagtcgatactt
gacagaaatgtttatgcgcgtctttcagatatgttgatgggtaagtttgccataggggga
ccgaaaggtttttcaaaaggcaaaaaacttgatagtagcattatggattcttatccgcgc
tcacagtggtggcaatttgctgttgatgatgaaaaacttcagggtgaaattgaagtcttg
cgtaatcaatatgatgcttcaaaagaggccctgcaacgtcgtttcatggataaagttgaa
aaagttcagcgtggcgatgagatgcctccgggtgtcatgaaaatggtgaaggttttcgtg
gctgtaaaacgtaaaattcagcccggtgataagatggcagggcgccatggtaataagggt
gtcgtgtctcggattctacctgtggaagatatgccgtttcttgaagatggaactcatgct
gatgttgtgttgaatccattgggtgttccaagtcgtatgaatgttggtcaaattcttgaa
actcaccttggctgggcttgtgctggtatgggtaaaaaaattggtgatttgatcgatttt
tacagagagacaggagatataattccattgcgtcagcgcattgaagattttattcctgat
aatggtcgcaacgagcctgtgcgtaagtatgatgatgagagtcttttgaagctggctctt
cagatgggaaagggtgtttcgattgcaacccctgtttttgatggagcacatgaatctgat
atcaatatgatgttagaggatgcaggtttagatagttctggtcaggtgacactttatgat
ggtcgtactggggagccgtttgatcggtctgtgactgtgggttacatctatatgcttaag
ttgcaccatctcgttgatgataagatccatgcacgttcgatagggccatactcacttgtt
actcaacagccgttgggtggtaaggcacagtttggtggtcaacgttttggtgaaatggag
gtttgggcacttgaagcttatggtgctgcttacactttacaagaaatgttaacagttaag
tcggatgatgtggcgggtaggacaaaggtttatgaagcaattgtgcgtggtgatgacacc
tttgaagcgggtatacctgaaagctttaatgttttagttaaggaaatgcgttcactcggt
ttgaatgtagaacttgacgatgtacgtgaatttactgcgcagcgagccttgcctgaaacg
atagattaa

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