KEGG   Buchnera aphidicola 5A (Acyrthosiphon pisum): BUAP5A_302
Entry
BUAP5A_302        CDS       T00820                                 
Symbol
himD
Name
(GenBank) integration host factor beta-subunit
  KO
K05788  integration host factor subunit beta
Organism
bap  Buchnera aphidicola 5A (Acyrthosiphon pisum)
Brite
KEGG Orthology (KO) [BR:bap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bap03032]
    BUAP5A_302 (himD)
   03036 Chromosome and associated proteins [BR:bap03036]
    BUAP5A_302 (himD)
   03400 DNA repair and recombination proteins [BR:bap03400]
    BUAP5A_302 (himD)
DNA replication proteins [BR:bap03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BUAP5A_302 (himD)
Chromosome and associated proteins [BR:bap03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    BUAP5A_302 (himD)
DNA repair and recombination proteins [BR:bap03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      BUAP5A_302 (himD)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_bac_2 HTH_Tnp_Tc5
Other DBs
NCBI-ProteinID: ACL30670
UniProt: B8D999
Position
complement(342246..342530)
AA seq 94 aa
MIKSELFERIAEQKINISNKMIERAAKEMLEHMIISLANGKRIEIRGFGSFSLHYRSSRI
GRNPKTGKSVKLNEKYVPYFKPGKKLRDRANIHK
NT seq 285 nt   +upstreamnt  +downstreamnt
atgataaaatcagaactattcgaaagaattgctgaacaaaaaattaatatttcaaataaa
atgatagagcgtgctgcaaaagaaatgttagaacacatgataatatcattagcaaatgga
aaaagaattgaaattcgaggatttggtagcttttctttacattatcgatcttctcgcatt
ggtcgtaatcctaagactggcaaatcagtcaaactaaatgaaaaatatgtaccttatttt
aaaccaggaaaaaaattacgagatcgagcaaatatacataaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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