KEGG   Bartonella apis: BBC0122_003520
Entry
BBC0122_003520    CDS       T05086                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
bapi  Bartonella apis
Brite
KEGG Orthology (KO) [BR:bapi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bapi03016]
    BBC0122_003520
Enzymes [BR:bapi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     BBC0122_003520
Transfer RNA biogenesis [BR:bapi03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BBC0122_003520
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AQT46487
UniProt: A0A1U9MEX4
Position
complement(405361..405981)
AA seq 206 aa
MAKIRVHKGDLPDLKNYNVKEVAIDTETLGLQPHRDRLCVVQISPGDGTADVIQIAKGQK
TAPNLVKILRDPDITKIFHFGRFDLAVLALTFGVMPRPVFCTKIASKLTRTYTDRHGLKD
LVAELLEINISKQQQSSDWGADELSSAQVEYAATDVLYLHRLKAILEARLIRDGRASVAK
SCFEFLPSRSELDLIGFPEVDIFAHS
NT seq 621 nt   +upstreamnt  +downstreamnt
atggctaaaatacgcgttcacaaaggcgacttgcctgacctgaaaaactataatgtcaag
gaagttgccattgacactgaaactctcggactgcaaccgcatcgtgaccggctctgcgtt
gtccagatttcgccgggtgatggcactgccgatgttatccagattgcaaaggggcaaaag
actgccccaaatctcgtaaaaatcctcagagatccggatattaccaagatattccatttt
ggccgtttcgatcttgccgtattggctttgacgttcggcgttatgccgagaccggttttc
tgcacaaaaattgcctcgaaactgacccgtacctataccgaccggcacggtttgaaagat
ctggtcgccgaacttcttgaaatcaatatttcaaagcagcaacaatcatcggattggggg
gcagacgagctgtcgtcggcgcaagtcgaatatgcagcaaccgacgttctttatcttcac
cggttaaaagcgattcttgaagcaaggctgatccgcgatggtcgggcaagtgtggcaaaa
tcttgtttcgagtttctgccgtcaaggtcggaacttgaccttatcggctttcccgaagtc
gatatttttgcgcatagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system