KEGG   Buchnera aphidicola USDA (Myzus persicae): BUMPUSDA_CDS00223
Entry
BUMPUSDA_CDS00223 CDS       T03022                                 
Symbol
pnp
Name
(GenBank) Pnp
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
bapu  Buchnera aphidicola USDA (Myzus persicae)
Pathway
bapu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bapu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BUMPUSDA_CDS00223 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bapu03019]
    BUMPUSDA_CDS00223 (pnp)
   03016 Transfer RNA biogenesis [BR:bapu03016]
    BUMPUSDA_CDS00223 (pnp)
Enzymes [BR:bapu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     BUMPUSDA_CDS00223 (pnp)
Messenger RNA biogenesis [BR:bapu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BUMPUSDA_CDS00223 (pnp)
Transfer RNA biogenesis [BR:bapu03016]
 Prokaryotic type
  tRNA degradation factors
   BUMPUSDA_CDS00223 (pnp)
SSDB
Motif
Pfam: RNase_PH PNPase RNase_PH_C S1 KH_1 KH_2 S1_2 SLS1_KH2 DUF6145
Other DBs
NCBI-ProteinID: AHG60015
UniProt: W0P3R9
Position
complement(413672..415729)
AA seq 685 aa
MARQATAAVMASMDDTAVFVTVVGQKKIHTGQKFFPLTVNYQERTYAAGRIPGGFFRREG
RPSENEILIARLIDRPIRPLFPKNFLNEVQIIATVVSVNPQINPDIISIIGASAALSLSG
IPFYGPVGAARVGYINNQYLLNPTSDDMKNSSLDLVVSGTQNAVLMVEAESKILSEEKIL
EAIIFGHQQQQVVINNIRSLSNEASKLPWTTSYPDINKALELKIIELSEKEISSAYLIFN
KQERFDRLNSIKEEIIKTFSDNNSNVSVLEIEAIFQKIEKKIVRKRILNNETRIDGREKD
MIRALDVRTGVLPRTHGSALFTRGETQSLVAVTLGTSRDAQNLDELLGDRTDNFLFHYNF
PPYSVGEIGTVGSPKRREIGHGRLAKRSLLAVMPKLDDFPYTIRIVSEITESNGSSSMAS
VCGASLALMDAGVPIKSAVAGISMGLVKEGEQYVLLSDILGDEDHLGDMDFKVSGTDIGI
TALQMDMKIEGITNEIIHTALNAARLARLHILNVMNQALSKSRNEISELAPRIHTIKISP
EKIKDVIGKGGSVIRMLTEETGTIIEIEDDGTVKISAAVSEKAKHAIRRIEEITAEIEVG
KIYSGKVTRIVDFGAFVSIGFGKEGLVHISQISDKRVDKVSDHLKIDQVISVKVLEIDRQ
GRLRLSIKEIENSIISNKIINHDII
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggcacgacaagcgacagcagctgttatggcaagtatggatgatacagcagtttttgta
actgttgtagggcaaaaaaaaatacatacaggtcaaaaattttttccacttactgttaat
tatcaagaacgtacatatgctgcaggtcgtataccggggggattttttagaagagaagga
cgtccaagtgaaaatgaaatattaatagctcgtttgatagatagacctattcgacctcta
tttcctaaaaattttttgaatgaagttcaaattattgcaacagttgtatcagttaatcct
caaattaatcctgatataatttctattataggcgcatcagcagcactgagtttatcgggt
attccattttatggtccagtaggtgctgcaagagtgggttatattaataatcaatactta
ttaaatcctacaagtgatgatatgaaaaatagttctttagatttagttgtttcaggaact
caaaacgctgttcttatggtagaagcagaatcaaaaatacttagtgaagaaaaaattctt
gaagctattatttttggtcatcaacaacaacaagtagtaattaataatattcgttcttta
tcaaatgaagctagtaaattaccttggacaacatcttatccagatataaataaagcatta
gaattgaaaattatcgaattatctgaaaaagaaataagttctgcttatttaatttttaat
aaacaagaaagatttgatagattaaattctattaaagaagaaataataaaaacattttct
gataataattcgaatgtttctgtgttagaaatagaagctatttttcaaaaaattgaaaaa
aaaattgtgcgtaaacgtatattaaataatgaaacgcgaattgatggacgagaaaaagat
atgattcgtgcattagatgtgcgtactggtgttttacctagaacacatggttctgcttta
tttactagaggagaaacacaatctttagttgcagtaactttaggaacatctcgagatgca
caaaacttagatgagttattaggagatagaacagataattttttatttcattataatttt
cctccttattctgttggagaaataggaacagtaggatcaccaaaaagacgtgaaattgga
catggtcgtcttgctaaaagaagtttattagctgtgatgccaaaattagacgattttccg
tatactattagaatagtttctgaaattactgaatcaaatggttcgtcttccatggcttct
gtttgtggagcttctttagctttaatggatgctggtgtacctattaaatctgctgttgct
ggtatatcgatgggtttagtgaaagaaggagaacaatatgtactactttcagatatttta
ggggatgaagatcatttaggagatatggactttaaagtttctggaacagatataggtatt
acagcattacaaatggatatgaagatagagggtattactaatgaaattatacatacagct
ctaaatgcagcaagattagctcgattacatattttaaatgtaatgaatcaagcattaagt
aaatcaagaaatgaaatttctgaacttgctcctcgtatccataccattaaaattagtcct
gaaaaaataaaggatgtaataggtaaaggaggttctgttattagaatgcttactgaagaa
actggtactataattgaaattgaagatgatggtacagttaagatatcagctgctgttagt
gaaaaagcaaaacatgctatccgcagaattgaagaaattacagcagaaattgaagtagga
aaaatttattcaggaaaagttactcgtattgttgattttggtgcttttgtttctatcggt
tttggaaaagaaggtttagttcatatttcacaaatttctgataaacgagttgataaagta
tctgatcatttaaaaattgatcaagtaatctctgtaaaagttttagaaatagatcgtcag
ggtcgtttgaggttaagcataaaagaaatagaaaattctattatttctaataaaataata
aatcatgatattatctga

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