KEGG   Bartonella sp. A1379B: BA1379B_004790
Entry
BA1379B_004790    CDS       T05185                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
bara  Bartonella sp. A1379B
Brite
KEGG Orthology (KO) [BR:bara00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bara03032]
    BA1379B_004790
   03400 DNA repair and recombination proteins [BR:bara03400]
    BA1379B_004790
Enzymes [BR:bara01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BA1379B_004790
DNA replication proteins [BR:bara03032]
 Prokaryotic type
  DNA Topoisomerases
   BA1379B_004790
DNA repair and recombination proteins [BR:bara03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BA1379B_004790
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom Toprim_4
Other DBs
NCBI-ProteinID: AQX18312
Position
complement(548926..551517)
AA seq 863 aa
MDIVIVESPAKAKTINKYLGSQYKVIASFGHVRDLSAKDGSVLPDKDFAMKWDIDTASAK
RLNEIAKAVKEADSLILATDPDREGEAISWHILDVLKQKKVLNDQRVKRVVFNAITKKSV
LDAMKNPRDIDISLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRIICNR
ESEIEQFIKEDYWSITTYLKTLQNNIFHARLIEFNHNKLGKLDIQSQEQADQILSMLEKA
NYRTLSIEAKPIKRNPSPPFTTSTLQQAASSKLGFSASRTMQVAQKLYEGVEINGETAGL
ITYMRTDGVQMASEAIDAARKAIIDSFGRNYLPEKPRFYSTKAKNAQEAHEAIRPTDFTR
HPNQVCNFLDSDQAKLYELIWKRAIASQMCSAEIERTTVEIEASQEENHAHLRATGSVIR
FDGFISAYTDPKEEENSDEDESTRLPQINVGESLTKEKVESVKHTTEPPPRYSESALIKK
LEELGIGRPSTYASTLSTLCDRGYIITDKRKLIPDVKGRIVTAFLENFFNRYVEYGFTAA
LEEKLDLISDGKLSWKDVLRDFWDEFNASITSIQELRIMNVLDVLNVTLAPLAFPTREDG
SDCRSCPLCTNGQLSLKLGRYGAFVGCSNYPECKYTCQLGSDTEEQSKAVHNDEPVMLGI
DPETGKDISLRHGRFGPYIQLGEGKEIKRASLPKGWHIENIDFDKALALLSLPREVGIHP
ETGKIITAAIGRYGPYLAHDGQYTNLFSTDEVFDIGINRAVTILAEKKESTTNRRKITPA
TLATLGDHPEGGLITIRNGLYGPYVNWNKINATLPKDKDPATVTLAEALELILAKASIKK
TKQKATSKKKATPKKSSPRKKKA
NT seq 2592 nt   +upstreamnt  +downstreamnt
atggatattgttatcgttgaatctccagcaaaagcaaaaacaatcaataaataccttgga
tctcaatacaaagtcatagcatcatttgggcatgtacgtgatttatctgcaaaagatggc
tctgttcttcctgataaagattttgctatgaagtgggatattgatactgcttcagcaaaa
cgtttgaatgaaatagcaaaagcagtcaaagaagccgatagccttatcttagcaacagac
cctgatcgtgaaggagaagctatttcatggcatatccttgatgttctaaaacaaaaaaaa
gttttaaacgatcaacgtgttaaacgagttgtttttaatgcaatcacgaaaaaatccgtt
cttgatgccatgaaaaatccacgcgatattgatatatcgcttgtagatgcctatcttgca
cgtcgagctctcgactacctggttgggtttactctctcacctgttttatggcgcaaatta
cctggtgctcgttctgctggtcgtgttcaatcagttgctttacgtatcatttgcaatcgc
gaatcagagattgagcaattcattaaagaagactactggtcaattacaacatacttgaaa
acactccaaaataatatttttcatgcacggttaatagaatttaaccataacaaacttggt
aagcttgatattcaatcccaagaacaagctgatcaaattctctctatgttggaaaaagca
aattatcgcacgttaagtattgaagccaagcctataaaaaggaatccttctccacccttt
acaacatctacattacaacaagctgcttcttcaaaattgggtttttcagcttctcgcaca
atgcaagttgctcaaaagctttatgaaggtgttgaaatcaatggtgaaacagcaggactt
attacttatatgcgtactgatggagtgcaaatggcttcagaagctattgatgcagcacga
aaagcgattattgattcttttggaagaaattatcttcctgaaaaaccacgtttttattca
acaaaagctaagaatgcacaagaagcacatgaagctattcgtcctacagattttacacgt
catcctaatcaagtgtgcaattttctcgatagtgatcaagcaaaactctatgaattaata
tggaaacgcgcaattgccagccaaatgtgttctgctgaaattgaacgtacaactgtcgaa
attgaagcatctcaagaagaaaatcacgctcatttacgcgcaacaggctctgttattcgt
tttgatggcttcatttctgcttatacggatccaaaagaagaagaaaatagtgatgaggat
gaatcaacacgtcttccgcagattaatgttggagaatcacttacaaaagaaaaagttgaa
tcggtcaaacatacgacagaaccacctcctcgttattctgaatctgcattaattaaaaaa
cttgaagaattgggaattggtaggccttcaacttatgcatctacattaagcacactttgt
gatcgtggatatatcataaccgataaacgcaaacttatccctgatgttaaaggacgtatt
gttacagcctttcttgaaaatttttttaatcgctatgtagaatatggttttacagcagct
cttgaagaaaaattagatcttatatccgatggaaaactttcctggaaagatgttttacgc
gatttttgggatgaatttaatgcatctattacgagtatccaagaactccgcataatgaac
gttcttgatgttttaaacgtaacgttagctcctcttgctttcccgacacgtgaagacgga
agtgattgccgctcttgtcccctttgtacaaatggccaattatcattaaaattagggcgc
tatggtgcattcgttggttgctctaattatcctgaatgtaaatatacatgccaattaggt
tcagatacagaagaacaaagcaaagcggtgcacaatgatgaacctgttatgctcggtatt
gatcctgaaacagggaaagatatttcccttcgtcatggccgctttggtccatatattcaa
cttggcgaaggtaaagaaattaagcgtgcaagtttgcctaaagggtggcacatagaaaat
attgattttgataaagctttagctttgctgtctttacctcgtgaagttggcattcatcct
gaaacaggaaaaataattacagccgcaattggacgatatggtccttatcttgctcatgat
ggacaatacacaaatctttttagtacagatgaagtctttgatatcggcattaatcgcgct
gttacaatacttgctgaaaaaaaagagagtacaacaaaccgacgtaaaataacacctgct
acgctggcaacactaggagatcacccagaaggtggactaattactatacgtaatggtctt
tatggtccatatgttaactggaataaaattaatgctaccttaccaaaggataaagatcca
gctacagtcacacttgcagaagcattagaacttatattagctaaagcatcgataaaaaaa
acaaaacaaaaagctacttcaaaaaagaaggcaacaccaaaaaaatcctcaccccgcaaa
aagaaagcataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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