KEGG   Bartonella sp. A1379B: BA1379B_009090
Entry
BA1379B_009090    CDS       T05185                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
bara  Bartonella sp. A1379B
Pathway
bara03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bara00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BA1379B_009090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bara03400]
    BA1379B_009090
DNA repair and recombination proteins [BR:bara03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BA1379B_009090
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BA1379B_009090
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 DUF87 AAA_22 SWI2_SNF2 Microtub_bd
Other DBs
NCBI-ProteinID: AQX18730
Position
1053946..1056366
AA seq 806 aa
MSHKKSKTTQKQINQRATDPFAVMKQCSKAKLHTVKSHNASFETINTKPSKNITKTNSVT
ATVEALSALIASGNPLFKNGALWTPHRPIRPEKSEGGIPFQIKTSFQPAGDQPIAIKSLV
EGIKRNERTQVLLGVTGSGKTYTMAKIIEKTQRPALILAPNKTLAAQLYGEFKNFFPNNA
VEYFVSYYDYYQPEAYVARSDTYIEKESSINEQIDRMRHAATRAVLERDDVIIIASVSCI
YGIGSVETYTAMTFQMQKGDKLDQQKLLTDLVSQQYQRQDINFVRGSFRVRGDTIEIFPA
HLEDRAWRISLFGDEIETITEFDPLTGQKTADLQSIKIYANSHYVTPRPTLNQAIKSIKM
ELVKRLDELNAAGRLLEAQRLEQRTIFDLEMLETTGSCSGIENYSRYLTGRKPGEPPPTL
FEYIPSHALVFIDESHVTIPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAM
RPQTIAVSATPGRWEIEQSQGIFVEQVIRPTGLIDPPTEIRPVKTQVDDAVNEIHQTIKK
GYRTLITVLTKRMAEDLTEYLHEQNIRVRYMHSDINTLERIEILQDLRLGTFDVLIGINL
LREGLDIPECGFVAIFDADKEGFLRSETSLIQMIGRAARNVESRVILYADTITGSIERAL
QETKRRRQKQIAYNKEHQITPTSIKKNIDDILSSVCENNHNVKISHFITQNNKVGNNLTN
HIQHLEKLMRKAANDLNFEEAAQFRDEIKRLQEIELAIADDSLVYNNKYSLDESIKSSLF
TKPNLDQMGPNTMDVGLLTKHKKEKR
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgtcacacaaaaaatcaaaaacaactcaaaaacaaatcaatcaaagagcaacagaccca
tttgcagttatgaagcagtgctctaaggccaaacttcatacagtgaaaagtcataatgct
tcatttgaaaccataaatactaaaccatctaaaaacataacaaaaacaaatagtgttaca
gcaacagttgaagctctttctgcactcattgcttcaggtaatcctctttttaaaaatggt
gcattatggacacctcatcgtcctattcgtcctgaaaaatcggaaggtggaattccattt
caaattaaaacatcctttcagcctgccggtgatcaacccattgcaatcaaatctttggtt
gaaggaattaagagaaatgaacgcactcaagtgcttttgggcgttaccggttcagggaaa
acatatacaatggccaaaatcattgaaaagacacaacgccctgctctcattttagcgcca
aacaaaactttagctgcacagctttatggggaattcaaaaacttttttcccaacaatgct
gttgaatattttgtttcttattatgactattatcaaccagaagcttatgttgcacgctca
gatacttatattgaaaaagaatcctctattaatgaacaaattgaccgcatgcgccacgca
gcaacacgcgctgtactagagcgcgatgatgtcattatcatcgcatctgtatcctgtatc
tatggaattggttcagtagaaacttatacagcaatgactttccaaatgcaaaaaggtgat
aaactcgatcagcagaaattactaactgatttagtttctcaacaatatcagcgacaagat
ataaactttgttcgtggctcttttcgtgttcgaggcgatacaattgagatttttcccgct
catcttgaagaccgtgcttggcgtatttcgttgtttggagatgaaattgaaacaattacc
gaatttgaccctttaacaggacaaaaaacagcagatcttcaatccattaaaatttatgct
aattcacattatgtaacaccacgacccacattaaatcaggcgataaaatcaatcaaaatg
gaattagtaaaacgcctcgatgaattaaatgcagctggtcgccttttggaagcgcaacgt
ttagaacaacgtacaatatttgatttagaaatgctagaaactactggatcttgctcagga
attgaaaactactcgcgctacctgacaggtagaaagccaggtgaaccacctccaactctg
tttgagtatattcctagccatgctcttgtttttattgatgagagtcatgtcacaattcct
caaatcggtggtatgtatcgaggtgatttccgacgaaaggctaccttagcagaatatggc
ttccgcttgccatcttgtatggacaatcgtcctttacgttttgaagaatgggatgcaatg
cgcccacaaactatcgctgtttcagctacacccggacgctgggaaatagaacaatcgcag
ggcatctttgtagagcaagtcattcgtcccacagggctgattgatccaccaacagaaata
cgcccagtgaaaacacaggtcgatgacgccgtcaacgaaattcaccaaacaatcaaaaaa
ggttatcgtacattaataacagttctcaccaaacgcatggcagaagatctgaccgaatat
ctccatgaacaaaatatccgtgtgcgttatatgcactctgatattaatacactagaacgt
attgaaatcctgcaagacctacgccttggtacttttgatgttttaattggtattaactta
cttcgagaaggtttagatattccagaatgtggttttgttgctatctttgacgctgataaa
gagggttttttacgttcagaaacctcacttattcaaatgattggacgagctgcacgtaat
gtagagagtcgggttattctttacgctgatacaattactggttctatcgagcgtgctttg
caagaaacgaaacgacgtcgacaaaaacaaatagcttataataaagagcatcaaattaca
ccgactagtattaaaaagaatattgatgatattctaagttcggtttgcgaaaataaccat
aatgtcaagatttctcattttatcacgcaaaataataaagttggcaacaatctaaccaac
catattcagcatctcgaaaaactcatgcgtaaagcagctaatgatctgaactttgaagaa
gctgctcaatttcgtgatgaaatcaaacgactacaagaaatagaattagccattgcagat
gattctttagtgtacaacaataaatattcccttgatgaatcgataaaatcaagtcttttc
acgaaaccaaatcttgatcaaatgggccctaataccatggatgttggtttattgacaaaa
cacaaaaaagaaaaaagataa

DBGET integrated database retrieval system