KEGG   Bartonella sp. Raccoon60: Bra60_006940
Entry
Bra60_006940      CDS       T05326                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
barr  Bartonella sp. Raccoon60
Pathway
barr03030  DNA replication
barr03430  Mismatch repair
barr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:barr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Bra60_006940
   03430 Mismatch repair
    Bra60_006940
   03440 Homologous recombination
    Bra60_006940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:barr03032]
    Bra60_006940
   03400 DNA repair and recombination proteins [BR:barr03400]
    Bra60_006940
Enzymes [BR:barr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Bra60_006940
DNA replication proteins [BR:barr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Bra60_006940
DNA repair and recombination proteins [BR:barr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Bra60_006940
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: AQX26697
Position
complement(737150..740638)
AA seq 1162 aa
MSGKKRKTPDNKNSLPRFIHLRVHSAYSLLEGALKVKQIIQHAISDRMPAIAITDTNNLF
GALEFSQYCFSDGIQPIIGCQLAIDFCDENCNLPLTKLRHSSDYSSIVLFAASETGYSHL
VRLVSRAYLDKNDTDLPHIKADFLLRHHEGIIALTGGPGGPINLALTEDKKERAIERLTY
LKKIFGDCLYVELQRHGSYDWKVEEALIELAYTYEIPLVATNEAFFLNKEGYAAHDALMA
VAEGQVVSNPNRKRVTSDHYLKSQDEMVSLFSDLPEALENSVEIALRCHAYAPIRKPILP
GFIERSADTSSVLEAEAKELLDQAKAGLKMRLETIGLAEGYTIADYEQRLNYEISVITRM
QFSGYFLIVSDFIKWAKAHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPD
RVSMPDFDIDFCQERREEVIRYVQQKYGCDQVAQIITFGKLQARAVLRDVGRVLEVPYRL
VDYLTKLVPATPGSNIELAQAIIDEPKFEEEKKKDPVIARMLDIALQLEGLYRHASTHAA
GIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQSGLVKFDFLGLKTLTVLKMAVDFVA
RKGTKVDLSHIPLNDEATYAMMSRGETVGVFQVESAGMRKALIGMRPDCIEDIIALVALY
RPGPMENISTYNIRKHKEEEITSIHPKIDHLVKETQGVIVYQEQVMQIAQELAGYSLGEA
DLLRRAMGKKIHKEMQEQRARFVSGAVDGGLDKEQANVIFDLLAKFADYGFNKSHATAYA
IVSYHTAYMKAHHPVEFLAASMTYDMTNTDKLNDFRREALRLGIEVIAPCVQTSHRIFEV
GENCIYYSLSAVKGVGDMVVDHIVACRGDKPFRDLEDFCERIDPRIVNKRAMESLIYAGA
FDCFNVAREVLLASLVTLNARALRILDNNSSGQVDIFEMLGGLKEPLILSQASPWSVAEK
LHYEFQVIGFYFSAHPLSEYQDVLIKKRVQTWNNFAASVKGGATAARLAGTVVAKQIRKT
KSGKKMGVIQFSDTSGQYEAVIFSEGLSVYGDMLEPGKSFIITVIAEDRSEGISLRIETI
QSLEEQALQCHKMMRIFLKTIDMLPQIEQNLNSEGKGEVALVLIQEDGLREVEIALPERY
KVNAHVVNAIKVLSGVVDVELS
NT seq 3489 nt   +upstreamnt  +downstreamnt
gtgtcaggaaaaaaaagaaaaacacccgataataaaaactctctccctcgctttattcac
ttgagggtacactcagcttattcacttcttgaaggtgctttaaaagtcaaacaaatcatt
cagcacgccatttctgatcgtatgcctgccatagctattacggatacaaataatttattt
ggtgctttagagttttcacaatactgtttttctgatggtattcaacctattattggttgt
cagcttgctattgatttttgtgatgaaaattgtaatttacctttaactaaattgcgtcat
tcttctgattattcttccattgtattatttgctgcgagtgaaacaggttattcgcatttg
gttcggcttgttagtcgtgcatatcttgataagaatgatacggatcttccgcatattaaa
gctgattttctcttaagacaccatgaaggaattattgctttaactggtggaccaggaggg
cctattaatttggctttaactgaagataaaaaagaacgagctattgagcgtttaacttat
ttgaagaaaatttttggtgattgtctttatgttgaattacaacggcatggttcttatgat
tggaaagtggaagaagcgcttattgaactagcttacacctatgagattcctcttgttgct
actaatgaggcattttttctcaataaagaaggatatgctgctcatgatgcgctcatggct
gttgcggaagggcaagttgtttctaatccaaatcgtaaacgtgtgacatcagatcattat
ttaaagtcacaagatgaaatggtttcactgttttctgatcttccggaggctttggaaaat
agtgttgaaattgctttacgctgtcatgcttatgcaccaattagaaaaccgattttgcct
ggttttatagagcgatctgcagatacatcctctgttttagaagcagaagctaaggaatta
ttagatcaagccaaagccggtttaaaaatgcgtcttgagacaattggtttagcagaaggc
tatacaattgcagattatgagcagcggcttaattatgaaatttcagttattacgcggatg
caattctctggttattttctcattgtttcggattttatcaaatgggcaaaagctcatgat
attcctgtcggtccagggcgtggttctggtgctgggtcccttgttgcctatgcactaacg
atcactgatgttgatcctttacgtttttctcttttatttgaacgttttcttaatccagat
cgtgtttctatgccagattttgatatcgatttttgtcaagaacgacgcgaagaagttatt
cgttatgttcagcaaaaatatggctgcgatcaagtcgctcagattattacattcggtaaa
ttgcaagcacgtgcagtattgcgtgatgttggtcgtgttttagaggtaccttatcgtctg
gtagattatctgacaaaattagttcctgctactcctggtagtaatattgagttagcacaa
gctattatagatgaaccaaaatttgaagaagaaaagaaaaaggaccctgttattgcgcgt
atgttagatatagcacttcagttagaaggactctatcgtcatgcctctactcatgctgca
gggattgttattggtgatcgtccattatcagagcttgtaccgatgtatcgtgatccacgc
tctgatatgcctgtaactcaatttaatatgaaatatgttgaacaatctggattggtaaaa
tttgattttttaggtttaaaaacgcttactgttttaaagatggctgttgattttgtcgca
cgaaaaggcacgaaggtagatttatctcatattccccttaatgatgaagcaacttatgct
atgatgtcacgtggtgaaacagttggcgtgtttcaagttgaaagtgctggtatgcgtaaa
gcacttattggtatgaggccagattgtattgaagatattattgctcttgtagcgctttat
cgtcctggtccgatggagaatatttcgacatataatatacgcaaacataaagaagaagaa
attacctctattcatcctaaaatagaccatttagttaaagaaacgcaaggtgttattgtt
tatcaagaacaagtgatgcagattgctcaggaacttgctggctactcacttggagaagca
gatttattgcgtagagctatgggtaaaaaaattcataaagaaatgcaagaacaacgtgca
cgctttgtaagtggggctgttgatggtggccttgataaggagcaggctaatgtaatcttt
gatcttttagcaaaatttgcggattacggttttaataagtcgcatgctaccgcttatgcg
attgtttcttatcatacagcttatatgaaagcacaccatcctgtagagtttttggctgca
tctatgacatatgatatgacaaatacagataagctcaatgattttcgacgtgaggcatta
agattaggaattgaggttattgcgccctgtgtgcaaacatcacaccgcatttttgaagtt
ggtgagaattgtatttattattccctttctgctgttaaaggggtaggagatatggtcgtt
gatcatatcgtggcttgtcgtggagacaagccttttagggatttagaagatttttgtgaa
cgtattgatcctcgtattgtgaataagcgtgctatggagagtttgatttacgctggcgcc
tttgattgttttaatgttgctcgtgaagttctactagcaagcctggtaactcttaacgca
cgtgctcttcgtattcttgataataattctagtgggcaagttgatatatttgagatgtta
ggtgggttaaaagagcctttgattttatctcaagcatctccttggtctgttgctgagaaa
cttcattatgaatttcaggtaataggtttttatttttctgctcatcctttgagtgagtat
caagatgttcttattaaaaaacgtgttcagacttggaacaattttgctgcttcagttaaa
gggggagctactgctgcccggcttgctggaactgttgtagcaaaacaaattcgtaaaaca
aaatctggtaagaaaatgggagtgattcagttttctgatacgagtgggcaatatgaagca
gttatattttccgaaggactttctgtatacggagatatgctggagcctggaaaatctttt
atcattacagttattgcggaggatcgctctgaaggaattagtttgcgtattgaaacaatt
cagtccttagaagaacaagcactgcaatgtcataaaatgatgcgcattttcctaaaaaca
atagatatgctaccacaaattgagcagaatttgaattctgaaggcaaaggagaggtagca
cttgtactaattcaagaggacggacttcgagaagttgagatagctcttccagaaaggtat
aaagtgaatgcccatgtagtcaatgctataaaagttctttctggtgtagttgatgtcgag
ttaagctaa

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