KEGG T05326: Bra60

Bartonella sp. Raccoon60: Bra60_010010

Entry

Bra60_010010      CDS       T05326

Name

(GenBank) Excinuclease ABC subunit B

K03702

excinuclease ABC subunit B

Organism

barr Bartonella sp. Raccoon60

Pathway

barr03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:barr00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Bra60_010010
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:barr03400]
    Bra60_010010
DNA repair and recombination proteins [BR:barr03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Bra60_010010
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Bra60_010010

SSDB

Motif

Pfam:

UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_30 AAA_22 SWI2_SNF2 DUF87 Microtub_bd

Other DBs

NCBI-ProteinID:

AQX26998

Position

1107502..1109922

AA seq 806 aa
MSHKKSKTTQKQINQRATDPSAVMKQRSKAKLHTVKSHNASFETINTKPSKNITKTNSVT
ATVEALSALIASGNPLFKNGALWTPHRPIRPEKSEGGIPFQIKTSFQPAGDQPIAIKSLV
EGIKRNERTQVLLGVTGSGKTYTMAKIIEKTQRPALILAPNKTLAAQLYGEFKNFFPNNA
VEYFVSYYDYYQPEAYVARSDTYIEKESSINEQIDRMRHAATRAVLERDDVIIIASVSCI
YGIGSVETYTAMTFQMQKGDKLDQQKLLTDLVSQQYQRQDINFVRGSFRVRGDTIEIFPA
HLEDRAWRISLFGDEIETITEFDPLTGQKTADLQSIKIYANSHYVTPRPTLNQAIKSIKM
ELVKRLDELNAAGRLLEAQRLEQRTIFDLEMLETTGSCSGIENYSRYLTGRKPGEPPPTL
FEYIPSHALVFIDESHVTIPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAM
RPQTIAVSATPGRWEIEQSQGIFVEQVIRPTGLIDPPTEIRPVKTQVDDAVNEIHQTIKK
GYRTLITVLTKRMAEDLTEYLHEQNIRVRYMHSDINTLERIKILRDLRLGTFDVLIGINL
LREGLDIPECGFVAIFDADKEGFLRSETSLIQMIGRAARNVESRVILYADTITGSIERAL
QETKRRRQKQIAYNKEHQITPTSIKKNIDDILSSVCENNHNVKISHFITQNNKVGNNLTN
HIQHLEKLMRKAANDLNFEEAAQFRDEIKRLQEIELAIADDSSVYNNKYSLDESIKSSLF
TKPNLDQMGSNTMDVGLLTKHKKEKR

NT seq 2421 nt +upstreamnt +downstreamnt
atgtcacacaaaaaatcaaaaacaactcaaaaacaaatcaatcaaagagcaacagaccca
tctgcagttatgaagcagcgctctaaggccaaacttcatacagtgaaaagtcataatgct
tcatttgaaaccataaatactaaaccatctaaaaacataacaaaaacaaatagtgttaca
gcaacagttgaagctctttctgcactcattgcttcaggtaatcctctttttaaaaatggt
gcattatggacacctcatcgtcctattcgtcctgaaaaatcggaaggtggaattccattt
caaattaaaacatcctttcagcctgccggtgatcaacccattgcaatcaaatctttggtt
gaaggaattaagagaaatgaacgcactcaagtgcttttgggcgttaccggttcagggaaa
acatatacaatggccaaaatcattgaaaagacacaacgccctgctctcattttagcgcca
aacaaaactttagctgcacagctttatggggaattcaaaaacttttttcccaacaatgct
gttgaatattttgtttcttattatgactattatcaaccagaagcttatgttgcacgctca
gatacttatattgaaaaagaatcctctattaatgaacaaattgaccgcatgcgccacgca
gcaacacgcgctgtactagagcgcgatgatgtcattatcatcgcatctgtatcctgtatc
tatggaattggttcagtagaaacttatacagcaatgactttccaaatgcaaaaaggtgat
aaactcgatcagcagaaattactaactgatttagtttctcaacaatatcagcgacaagat
ataaactttgttcgtggctcttttcgtgttcgaggcgatacaattgagatttttcccgct
catcttgaagaccgtgcttggcgtatttcgttgtttggagatgaaattgaaacaattacc
gaatttgaccctttaacaggacaaaaaacagcagatcttcaatccattaaaatttatgct
aattcacattatgtaacaccacgacccacattaaatcaggcgataaaatcgatcaaaatg
gaattagtaaaacgcctcgatgaattaaatgcagctggtcgccttttggaagcgcaacgt
ttagaacaacgtacaatatttgatttggaaatgctagaaactactggatcttgctcagga
attgaaaactactcgcgctacctgacaggtagaaagccaggtgaaccacctccaactctg
tttgagtatattcctagccatgctcttgtttttattgatgagagtcatgtcacaattcct
caaatcggtggtatgtatcgaggtgatttccgacgaaaggctaccttagcagaatatggc
ttccgcttaccatcttgtatggacaatcgtcctttacgttttgaagaatgggatgcaatg
cgcccacaaactatcgctgtttcagctacacccggacgctgggaaatagaacaatcgcag
ggcatctttgtagagcaagtcattcgtcccacagggctgattgatccaccaacagaaata
cgcccagtgaaaacacaggtcgatgacgccgtcaacgaaattcaccaaacaatcaaaaaa
ggttatcgtacattaataacagttctcaccaaacgcatggcagaagatctgaccgaatat
ctccatgaacaaaatatacgtgtgcgttatatgcactctgatattaatacactagaacgt
attaaaatcctgcgagacctacgccttggtacttttgatgttttaattggtattaactta
cttcgagaaggtttagatattccagaatgtggttttgttgctatctttgacgctgataaa
gagggttttttacgttcagaaacctcacttattcaaatgattggacgagctgcacgtaat
gtagagagtcgggttattctttacgctgatacaattactggttctatcgagcgtgctttg
caagaaacgaaacgacgtcgacaaaaacaaatagcttataataaagagcatcaaattaca
ccgactagtattaaaaagaatattgatgatattcttagttcggtttgcgaaaataaccat
aatgtcaagatttctcattttatcacgcaaaataataaagttggcaacaatctaaccaac
catattcagcatctcgaaaaactcatgcgtaaagcagctaatgatctgaactttgaagaa
gctgctcaatttcgtgatgaaatcaaacgactacaagaaatagaattagccattgcagat
gattcttcagtgtacaacaataaatattcccttgatgaatcgataaaatcaagtcttttc
acgaaaccaaatcttgatcaaatgggctctaataccatggatgttggtttattgacaaaa
cacaaaaaagaaaaaagataa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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