KEGG   Bartonella sp. JB15: BJB15x_000230
Entry
BJB15x_000230     CDS       T05113                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
bart  Bartonella sp. JB15
Pathway
bart03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bart00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BJB15x_000230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bart03019]
    BJB15x_000230
   03016 Transfer RNA biogenesis [BR:bart03016]
    BJB15x_000230
Enzymes [BR:bart01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     BJB15x_000230
Messenger RNA biogenesis [BR:bart03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BJB15x_000230
Transfer RNA biogenesis [BR:bart03016]
 Prokaryotic type
  tRNA degradation factors
   BJB15x_000230
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 DUF1108
Other DBs
NCBI-ProteinID: AQX27445
UniProt: A0A1S6XFQ5
Position
complement(25031..27232)
AA seq 733 aa
MFKTHKVEIEWAGRPLILETGKIARQADGAIIATYGETVVLATVVSAKTPKPDQNFFPLT
VNYQEKNYAVGKIPGGYFKRENRSSESETLISRLIDRPIRPLFVDGYKNDTQVIASVIQH
DLENNPDILAIIASSAALTLSGIPFMGPIAAARIGYCNGQYILNPNIDEMPESKLDLIVA
GTENAVLMVESEAHELPEDVMLNAVMFGQKSFQPVINAIIKLAEVAAKKPCDFTPEDLSV
LEKNMLKMVEQDLREAYTITDKQKRYTAIDVLKEEVINKFTQETEENCEFNTDQIATVFK
HLQAKIVRQNILDTGKRIDGRNPSDVRAIQSEVGILPRTHGSALFTRGETQALVVTTLGT
GEDEQYIDSLTGMYKETFLLHYNFPPFSVGEIGRIGSPGRREIGHGKLAWRAIHPMLPTK
ESFPYTIRTVSEITESNGSSSMATVCGTSLALMDAGVPLARPVAGIAMGLIKEGERFAIL
SDILGDEDHLGDMDFKVAGTESGITSLQMDIKIDGITEEIMKIALAQAKDGRIHILNEMA
KALTSARSELSEFSPRIEIMNITVDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTIKIA
SSDLKTIEAAKHWILSIVNEPEIGAIYQGTVVKIAEFGAFVNFFGSRDGLVHISQLASER
VAKTTDIVKEGDKVWVKLMGFDERGKIRLSMKVVDQQTGKELINGGSIKTEKDNNTDEKN
PSKKKHRSKKKKD
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgtttaaaacccataaagtagaaattgaatgggccggtcggccacttatcctcgaaaca
ggaaaaattgcgcgtcaagcagatggtgccattattgctacatatggtgaaactgttgtt
ttggcaactgttgtttcagcaaaaactccaaaaccagatcaaaatttttttccactcacc
gttaattatcaagaaaaaaactatgcagttggtaaaatacctggtggttattttaaacga
gaaaaccgttcaagtgaaagtgaaactttgatttcacggttgattgatcgtccaattcgt
cctctttttgtcgacggttataaaaatgacacacaagtgattgcctctgttattcagcat
gatctagaaaataatcccgatatccttgctataattgcatcttctgctgcattaactcta
tcaggtattccttttatgggtccaattgccgctgctcgtattggatattgtaatggacaa
tatattctcaatcctaacattgatgaaatgcctgaatcaaaacttgatcttattgttgcc
ggaacagaaaatgctgtactgatggttgaatcagaggcgcatgaattacctgaagatgta
atgttgaatgctgtcatgtttggtcaaaaaagttttcaacctgtaattaatgccatcatc
aaacttgccgaagtagcggctaaaaaaccttgtgactttactccagaagatctgtctgtg
cttgaaaaaaacatgcttaaaatggtcgaacaggatctgagagaagcttatacaattacc
gataaacaaaaacgctatactgcgattgatgttcttaaagaagaagtcatcaataaattc
acgcaggaaacagaagaaaattgcgaatttaatacagatcagattgcaactgttttcaaa
catttgcaagcaaaaatcgttcgccaaaacattcttgatacaggaaaacgtattgatgga
cgtaatccctcagatgttcgtgcaattcaatcagaagttggtattttgccccgcacacat
ggatcagcgttatttactcgtggtgaaacacaagcacttgtagtaacaacattaggaacc
ggagaagatgaacaatatatagactccttaacgggcatgtataaagaaacattcctcctt
cattacaattttccacctttttcagtaggtgaaataggccgtattggctcacctggccgc
cgcgaaattggtcatggtaaactggcatggcgtgctattcatcccatgttgccgacaaaa
gaatcctttccctacactattcgtactgtatcagaaattaccgaatcgaatggatcttct
tcaatggcaaccgtttgcggaacttcactagcactcatggatgctggtgttcctttagca
cgccctgttgctggtattgcaatgggtttgattaaagaaggtgaacgatttgctattcta
tctgatattttaggggatgaagatcatcttggtgatatggatttcaaagtagcaggtaca
gaaagcggtattacttccttacaaatggatatcaaaattgatggcattactgaagagatt
atgaaaatcgcacttgcacaagctaaagatggtcgaatccatattctcaatgaaatggca
aaagccttaaccagtgcacggagtgaactgagcgaattttctccacgtattgaaataatg
aacattactgtagataaaattcgtgatgttatcggctctggtggtaaagtaatccgcgaa
attgtggaaaaaactggagctaaaattaatattgaagatgatggaacaattaaaattgct
tcttctgatttaaaaaccattgaagcagcaaaacattggatcctttcaattgttaatgaa
cctgaaatcggtgctatttaccaaggaacggttgttaaaattgcagaattcggtgcattc
gttaacttttttggttcacgcgatggacttgttcatatctctcaactcgcatcagaacgt
gtagcaaaaacaaccgatattgttaaagaaggtgataaagtttgggttaaattaatgggc
ttcgatgaacgtggtaaaattcggttatcgatgaaagttgttgaccaacaaactggaaaa
gaacttatcaatggtggttcaataaaaacagaaaaagataataatactgatgaaaagaat
ccatctaaaaagaaacaccgtagtaagaaaaaaaaggattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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