KEGG   Buchnera aphidicola Tuc7 (Acyrthosiphon pisum): BUAPTUC7_033
Entry
BUAPTUC7_033      CDS       T00821                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bau  Buchnera aphidicola Tuc7 (Acyrthosiphon pisum)
Pathway
bau03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BUAPTUC7_033 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bau03021]
    BUAPTUC7_033 (rpoC)
   03400 DNA repair and recombination proteins [BR:bau03400]
    BUAPTUC7_033 (rpoC)
Enzymes [BR:bau01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BUAPTUC7_033 (rpoC)
Transcription machinery [BR:bau03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BUAPTUC7_033 (rpoC)
DNA repair and recombination proteins [BR:bau03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BUAPTUC7_033 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 ApbA_C
Other DBs
NCBI-ProteinID: ACL29864
Position
complement(36335..40558)
AA seq 1407 aa
MKDLLKFLKSQTKNEDFDAIKISLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQSKVRRERMGHIELSSPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIETGMTNLEKRQILTEEQYLDSLEEFGDEFHATM
GAEAIQFLLKDINLVQECNVLRIELNETNSETKRKKLTKRIKLLESFIQSHNKPEWMILN
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LHLHQCGLPKKMALELFKPFIYGKLEVRGLATTIKAAKKMVEREEAIVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLESQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREKINGKGEGMLLNGSNEAEKVYRLG
IAELHSLVKVRIIEYKKNEDKSFTAIKKIIPTTIGRAILWMIIPKGLPFSIVNQTLGKKD
ISKMLNTCYRILGLKSTVFFADQIMYTGFAYAARSGASVGIDDMVIPEKKANIINEAEIE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMQNLSTESVINKKGYKQKQISFN
SIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTQDDCRTHEGILMTPLIEGGDVKEPLRERVL
GRVTAENIIIPNTKNILIKRNTLLNEKWCDLLEHNSIDNVKVRSVVNCDTDFGVCAYCYG
RDLARGNLVNKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNQGIINL
NNAKFVINSAGKTVITSRNVELNIIDNFGRTKESYKVPYGAIMAKGDGEKVNSGETVAKW
DPHTMPVITEVNGLVRFVDMIDGQSITRQADELTGLSSIVILDTAERMSSGKDLRPALKI
IDCNGNDVLISGTDMPAQYFLPGKAIVQLDDGVQISSGDTLARVPQESGGTKDITGGLPR
VADLFEARRPKELAILAEISGIISFGKETKGKRRLVITPVDGSDSYEEMIPKWRQLNVFE
GERVDRGDVISDGPESPHDILRLRGVQAVTRYIVNEVQEVYRLQGVKINDKHIEVIIRQM
LRKATVVKSRDSDFLEGEQVEFSHIKISNRMLDKKKKMPATFSRDLLGITKASLATESFI
SAASFQETTRVLTESAVAGKRDELRGLKENVIVGRLIPAGTGYAYHKERLNRRQKKHNNP
TVSSSQISAEEASASLSELLNSALIEK
NT seq 4224 nt   +upstreamnt  +downstreamnt
gtgaaagatttactaaaatttctaaaatcccaaactaaaaatgaagattttgatgctatt
aaaatctcgttagcttcacctgatatgatcagatcatggtcatttggggaagtcaaaaaa
cctgaaactattaattatcgtacatttaaacctgaacgagatggattattttgtgctcgc
atttttggtccagtaaaagattacgaatgtttgtgtggtaaatataaaagattaaaacat
agaggagtaatttgtgaaaaatgtggtgttgaagtaacacaaagcaaagttagacgtgaa
cgaatgggtcatatagaactttcttcacctacagctcatatttggttcttaaaatctttg
ccatcaagaataggtttattattagatatgcctttaagagatattgaaagagtactatat
tttgaatcttatgttgtcatagaaacaggcatgactaatcttgaaaaacgtcaaatttta
accgaagaacaatatctagattcattggaagaatttggagatgaatttcatgctacaatg
ggagcggaagcgattcaatttttattgaaagatattaatttagtacaagaatgtaatgta
ttgagaatagaactaaatgaaacaaattctgaaacaaaaagaaaaaaattaacaaaaaga
attaaactattagaatcttttattcaatcgcataataaacctgaatggatgattcttaac
gtattaccagtattaccacctgatctaagaccattagtaccattagatggaggtagattt
gcaacatcagatttaaatgatttgtatcgtcgagtgatcaatagaaataatcgtcttaaa
cgtttattagatttagcagctccagatataattgtacgcaatgaaaaaagaatgttacaa
gaagcagtagatgctttattagataatggtcgaagaggtagagcaattacaggatcaaac
aaaagacctcttaaatcattagctgatatgattaaaggaaaacagggaagatttcgacaa
aatcttcttgggaaacgtgtagattattctggtcgttcagtaattactgtaggtccttat
cttcatttgcatcaatgtggtctacctaaaaaaatggcattagaactttttaaacctttc
atatatggcaaattagaagtgcgtggtttagccactactattaaagcagcaaaaaaaatg
gtggaaagagaagaagcaatagtgtgggatattttagacgaagtaatccgcgaacaccca
gttcttttaaatcgtgcacctactttacatcgattaggtattcaagcatttgagccagtc
cttatagaaggaaaagctattcaacttcatccattagtatgtgcggcttacaatgctgat
tttgatggagaccaaatggctgtccatgtcccattaactctagaatcacagttagaagct
agagctttaatgatgtcaactaataacattttatcacctgcaaatggtgaaccaattatt
gtaccttctcaagatgttgttttagggttgtattatatgactcgcgaaaaaatcaatgga
aaaggtgaaggtatgttattaaatggttctaatgaagcagaaaaagtataccgtttaggt
attgctgaactacattcactagtaaaagttcgaataatagaatataaaaaaaatgaagat
aaaagttttactgcaataaaaaaaataattcctactactataggtcgagcaattttgtgg
atgattatcccaaaaggactaccttttagtattgttaatcaaactttaggtaaaaaagat
atttctaaaatgcttaatacttgttatcgtattttaggactgaaatctactgtttttttt
gctgatcaaattatgtacaccggattcgcttatgcagcaagatctggagcttcggtaggt
attgatgatatggtaataccagaaaaaaaggcaaatatcatcaatgaggctgaaattgaa
gttgctgaaatacaagaacaattccaatctggattagtgactgcaggtgaaagatataat
aaagttattgatatttgggcggcagctaatgaacgagtagcaaaagcgatgatgcagaac
ttatctacagaatctgttatcaacaaaaaaggttacaaacaaaagcaaatatcttttaat
agtatatttatgatggctgattcgggggcacgtggttctgccgcacaaattcgtcaatta
gctggtatgagaggattgatggccaaacctgatggttctattattgaaacaccaattaca
gctaattttagagaaggtttgaatgtattacaatattttatttctacacatggagctcgt
aaaggattagctgatacagcactaaaaactgcaaactctggatacttaacacgtcgttta
gtagatgtagctcaagatttagttgtaacacaagatgattgtcgaacacatgaaggaatt
ttaatgactccattaattgaaggaggagatgtaaaagaaccactacgtgaacgtgtttta
ggtcgtgttactgcggaaaatattattattccaaatactaaaaatatattaatcaaaaga
aatacacttctaaatgaaaaatggtgtgatcttttagagcacaattctatagataatgtc
aaagtacgatcagtagtaaattgtgatactgattttggtgtatgcgcttactgctatggt
cgagatttagcacgaggtaatttagtcaataaaggagaagcaattggggtaattgctgca
caatctataggagagccaggcacacagctaactatgagaaccttccatattggtggtgca
gcatccagagctgcagcagaatctagtattcaagtaaaaaatcaaggtattataaatctt
aataatgcaaaatttgtaattaattctgctggtaaaacagtaattacttcaagaaatgta
gaactaaatattatcgataattttggaagaacaaaagaaagctataaagttccttatgga
gctattatggctaaaggggacggtgaaaaagtaaattcaggggaaactgttgcaaaatgg
gatccacataccatgccagttattactgaagttaatgggttagtacgttttgtagatatg
attgatggtcaaagtattacaagacaagcagatgaactaacaggtttgtcttctatagta
atattagatacagcagaaagaatgtctagtggtaaagatttaagaccagcattaaaaatt
atcgattgtaatggaaatgatgttcttatttcaggaacagatatgccggctcaatatttc
ttacctggaaaagcaatcgttcaacttgatgacggagtacaaatcagttcaggcgataca
ttagcgagagtcccacaagaatctggaggtactaaagacataacaggtggattaccaaga
gtagcagatttatttgaagctagacgcccaaaagaattagcaattttagcggaaattagt
ggcattatatcttttggaaaagaaactaaaggtaaaagaagattagtaattacaccagta
gatggtagtgattcttatgaagaaatgattccaaaatggagacaattaaatgtatttgaa
ggagaacgagtagatcgaggagatgtcatatctgatgggccggaatcaccacatgatatc
ttaagattaagaggtgttcaagctgtaactagatatatagtgaatgaagtacaagaagta
tatcgtttacaaggtgtaaaaattaacgacaaacatattgaagtaattatacgacaaatg
cttcgaaaagctactgtagttaaatcaagagattcagattttctggaaggtgaacaagtt
gaattttctcatataaaaatatcaaatcgcatgttagataaaaaaaagaaaatgccagct
actttttcaagagatttattaggaattactaaagcatcacttgcgacagaatcttttata
tctgcagcttctttccaagaaacaacaagagtattaacagaatctgcagttgcaggaaaa
agagatgaattaagaggattaaaagaaaatgtaattgttggacgtttaattcctgcagga
acaggatatgcatatcacaaagaacgtttgaatcgtcgtcaaaaaaaacataacaatcca
acagttagcagttctcaaattagtgctgaagaagcttctgctagtctttcagaattatta
aattctgctcttatagaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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