KEGG   Bordetella avium: BAV0533
Entry
BAV0533           CDS       T00695                                 
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bav  Bordetella avium
Pathway
bav03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BAV0533 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bav03400]
    BAV0533 (mutM)
Enzymes [BR:bav01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     BAV0533 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BAV0533 (mutM)
DNA repair and recombination proteins [BR:bav03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BAV0533 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Auto_anti-p27 C1_2 RNHCP DZR zinc-ribbons_6 Ribosomal_S13
Other DBs
NCBI-ProteinID: CAJ48138
UniProt: Q2KYB7
Position
complement(554522..555349)
AA seq 275 aa
MPELPEVETTRRGIDPVITGQTLRRLVVREPRMRWPIPADLPSLLTDRPVLATGRRGKYL
LLRFEHGVQIVHLGMSGSLRRVAMDEAPRKHDHVDWVFDHAILRLHDPRRFGAVLWHPNT
DGPVEAHPLLIGLGIEPFDPRFDGKWLHDHFRDKRVAVKQALLAGHAVVGVGNIYASECL
FRAGIDPRTPAGKLSRPRCERLAQAVRATLADALASGGSTLRDYVGASGEPGAYFAIHAA
VYERAGLACRVCGTPIRRLVQGQRATYFCPHCQKR
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccggaactgcctgaagtagaaaccacgcgccggggaatcgaccctgtcatcaccggc
cagacactgcgccgccttgtcgtacgggagccacgcatgcgctggcccatccccgccgac
ctgccctctcttctgacagaccgcccggtgctggccaccggccgccgcggcaaatacctg
ttgctgcgctttgagcacggcgtgcagatcgtgcatctgggcatgtcgggttcgctacgc
cgggtagccatggacgaggcgccacgcaagcacgatcacgtcgattgggtctttgatcac
gccatcctgcggctgcacgatccgcgccgctttggcgccgtgctctggcatcccaacacc
gacgggcccgtcgaggcgcatcccctgctgatcggcctgggcattgaaccctttgatccg
cgttttgacggcaaatggctgcacgatcactttcgtgacaagcgggtcgccgtgaaacag
gccctgctggctggccatgccgtggtcggcgtgggcaatatctacgcatcggagtgcctg
ttccgggcgggtatcgacccgcgcacgcctgccggcaagctgtcgcgcccgcgctgcgaa
cggctggcccaggccgtgcgcgctacgctggccgatgccctggcttcgggcggcagcacc
ctgcgcgattacgtcggggcgtcgggcgagccgggcgcttatttcgccatccatgcggcg
gtttacgagcgcgccggactggcttgccgggtgtgcggcaccccgatccggcgcctcgtg
caggggcagcgggctacgtatttctgtccccattgccagaaacggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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