KEGG   Bordetella avium: BAV3002
Entry
BAV3002           CDS       T00695                                 
Name
(GenBank) putative ribonuclease
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
bav  Bordetella avium
Brite
KEGG Orthology (KO) [BR:bav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bav03016]
    BAV3002
Enzymes [BR:bav01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BAV3002
Transfer RNA biogenesis [BR:bav03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BAV3002
SSDB
Motif
Pfam: RNB UPF0158
Other DBs
NCBI-ProteinID: CAJ50612
UniProt: Q2KUU6
Position
3266764..3268650
AA seq 628 aa
MYVFYEDDGSFKAGKILSEADASLQVESESGKRSKIKRANTLFTFASPEPVALMRDAAAL
AEGIDLAFLWECAPQEEFDAPVLAADYFGHAPSAVEQAALLMRLHGAPVYFHRRGKGHYR
PAPPDILQAALAALEKKQRQAEQQDAWVEEMAQGRLPEAIGQMAESLLVRPDKNTMQWKA
LDAACTRLQKSPDRLLLELGAWPHALALHKQRFLAVNFPRGVAFPEVEIPPLERELPLAD
AEIYSIDDITTTEIDDALSVTPMADGKVRVGIHVAAPGLSVTRGGELDKLARQRLSTVYM
PGDKIPMQPDSVIQAFSLDAGRAVPALSLYVTADPITGEIIASETRIERIVVRENLRHNQ
LDTEITEAALADPDAPLPYAHWLRPLWQLAQALSAQREVIRGKPENNSRVEYSFYLDGSP
DDPDTPVRLVPRQRNAPLDRMVAEFMILANNLWGGLLHQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLVAPFKPKDADLFAIIGAF
DAQYATWADFQNAMERYWCMRWLRQQNITRCVAHVLREDLVRLGNAPFVTRVGGMPELER
GAAVEIDILGMDELSLELDCRYLGLANA
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgtacgtgttttacgaagatgacggcagcttcaaggccggcaagattctctcagaagcc
gatgccagcctgcaggtggaatcggagtcgggcaaacgcagcaagatcaaacgcgccaac
acgctgtttaccttcgcctcgcccgagcccgtggccttgatgcgtgatgcggccgccctg
gccgaaggcatcgacctggcctttctgtgggagtgcgctccccaggaagaattcgacgcc
cccgtactggcggccgattatttcggccatgcgcccagcgccgtcgagcaggccgcgctg
ctgatgcgattgcatggcgcgccggtgtatttccatcgccgcggcaagggccattatcgt
ccggcgccccccgacattcttcaagccgccctggccgcgctggagaaaaaacagcgccag
gccgaacaacaggatgcctgggtcgaggaaatggctcagggcaggctgcccgaagccatc
ggccagatggccgaatcgctgctggtccgtcctgataaaaacaccatgcaatggaaggca
ctggacgccgcctgcacccgcttacagaaaagccctgaccggctgctgctggaactgggc
gcctggccgcatgcgctggccctgcacaagcaacgttttctggccgtgaatttcccgcgt
ggcgtggcgtttcccgaggtggaaatcccgccgctggaacgtgagctgccgctggccgac
gccgaaatctattcgattgacgatatcaccaccaccgaaatcgacgatgccttgtcggtc
acgccgatggccgatggcaaggtgcgcgtgggcatccacgtcgccgcaccgggtctgagc
gtcacgcgcggtggcgagctcgacaagctggcgcggcaacggctgtccacggtttatatg
ccgggcgataagattcccatgcagccggattcggtcattcaggcgttttcgctggatgcg
ggacgcgccgtgccggccttgtctctctacgtcaccgcagacccgatcactggcgaaatc
atcgcctcggaaacccgtatcgagcgcattgtggtgcgcgagaacctgcgtcacaatcaa
ctcgacacggaaatcaccgaggcggccctggccgatcccgacgcgccgctgccctatgcg
cattggctgcgcccgctgtggcagctcgcccaggcgctgtcggcccagcgcgaggtcatt
cgcggtaaacccgaaaacaacagccgcgtcgaatacagcttctatctggacggcagccct
gacgatcccgacaccccggtccgtctggtgccgcgccagcgcaacgcgccgctggaccgc
atggtggccgagttcatgattctggccaacaatctgtggggcggcctgctgcatcaacac
ggggtgccgggcatttaccgctcgcagcaggcgggccgcgtgcgcatgagcacccaggcc
ctaccgcacgaagccatcggcgtgccgcaatatgcctggagcacctcgccgctgcgccgt
tatgtcgatctggtcaatcaatggcaattgatcgcggcggtcgaacacggcgtgtccgcc
cgcctggtggctcccttcaagcccaaggacgccgacctgttcgccatcatcggcgccttt
gacgcgcagtatgcgacctgggctgacttccagaacgcaatggagcgctattggtgcatg
cgctggctgcgccagcagaacatcacccgttgcgtcgcgcatgtgctgcgcgaggatctg
gttcgcctaggcaatgcgcccttcgtgacgcgggtgggcggcatgcctgagctcgaacgc
ggcgccgccgtcgaaatcgacattctgggcatggacgagctgtcgctggaactggattgc
cgctatctgggtctggcgaacgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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