KEGG   Bacillus amyloliquefaciens TA208: BAMTA208_00720
Entry
BAMTA208_00720    CDS       T01824                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
baz  Bacillus amyloliquefaciens TA208
Pathway
baz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:baz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BAMTA208_00720 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:baz03021]
    BAMTA208_00720 (rpoA)
   03400 DNA repair and recombination proteins [BR:baz03400]
    BAMTA208_00720 (rpoA)
Enzymes [BR:baz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BAMTA208_00720 (rpoA)
Transcription machinery [BR:baz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BAMTA208_00720 (rpoA)
DNA repair and recombination proteins [BR:baz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BAMTA208_00720 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 PASTA
Other DBs
NCBI-ProteinID: AEB22336
Position
139260..140204
AA seq 314 aa
MIEIEKPKIETVEISDDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTIEGVVEDVTTIILHIKKLALKIYSDEEKTLEIDVQGEGTVTAADITHDSDVEI
LNPDLHIATLGENASFRVRLTAQRGRGYTPADSNKRDDQPIGVIPIDSIFTPVSRLSYQV
ENTRVGQVANYDKLTLDVWTDGSTGPKEAIALGSKILTEHLNIFVGLTDEAQHAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
AKLEELGLGLRKDD
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatcgagattgaaaaaccaaaaatcgaaacggttgaaatcagcgacgatgccaaattt
ggtaagtttgtcgtagagccgcttgagcgtggatatggtacaactctgggtaactcctta
cgtcgtatcctcttatcctcactccctggtgccgctgtaacatcgatccagatagatggt
gtactgcacgaattctcgacaatcgaaggcgttgtggaagatgttacaacgataatcttg
cacattaaaaagcttgcattgaaaatctactctgatgaagagaagacgcttgaaattgat
gtacagggtgaaggaactgtcacagcagctgacattacacacgacagcgatgttgaaatc
cttaatccggatcttcatatcgcgactcttggtgagaatgcgagtttccgagttcgcctt
actgcacaaagaggacgtgggtatactcctgctgattcgaacaaaagagacgatcagcca
atcggcgtgattccgatcgattcaatctttacgccagtttcccgtttatcttatcaggtg
gaaaacactcgtgtaggccaggttgcaaactatgacaaacttacacttgatgtttggact
gacggaagcactggaccgaaggaagcaattgctcttggttcaaagattttaactgaacac
cttaatatattcgttggtttaactgacgaagctcagcatgctgaaatcatggttgaaaaa
gaagaggatcaaaaagaaaaagttcttgaaatgacgattgaggaacttgatctttctgtc
cgttcttacaactgcttgaagcgtgcgggcattaacacggttcaagaacttgcgaacaag
acggaagaagatatgatgaaagttcgcaacttgggacgcaaatcacttgaagaagtgaaa
gcgaaacttgaagaacttggactcggccttcgcaaagacgattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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