KEGG   Bacillus amyloliquefaciens TA208: BAMTA208_09840
Entry
BAMTA208_09840    CDS       T01824                                 
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
baz  Bacillus amyloliquefaciens TA208
Pathway
baz00010  Glycolysis / Gluconeogenesis
baz00020  Citrate cycle (TCA cycle)
baz00260  Glycine, serine and threonine metabolism
baz00280  Valine, leucine and isoleucine degradation
baz00310  Lysine degradation
baz00380  Tryptophan metabolism
baz00620  Pyruvate metabolism
baz00630  Glyoxylate and dicarboxylate metabolism
baz00640  Propanoate metabolism
baz00785  Lipoic acid metabolism
baz01100  Metabolic pathways
baz01110  Biosynthesis of secondary metabolites
baz01120  Microbial metabolism in diverse environments
baz01200  Carbon metabolism
baz01210  2-Oxocarboxylic acid metabolism
baz01240  Biosynthesis of cofactors
Module
baz_M00009  Citrate cycle (TCA cycle, Krebs cycle)
baz_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
baz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
baz_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:baz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    BAMTA208_09840 (pdhD)
   00020 Citrate cycle (TCA cycle)
    BAMTA208_09840 (pdhD)
   00620 Pyruvate metabolism
    BAMTA208_09840 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    BAMTA208_09840 (pdhD)
   00640 Propanoate metabolism
    BAMTA208_09840 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BAMTA208_09840 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    BAMTA208_09840 (pdhD)
   00310 Lysine degradation
    BAMTA208_09840 (pdhD)
   00380 Tryptophan metabolism
    BAMTA208_09840 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    BAMTA208_09840 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:baz04147]
    BAMTA208_09840 (pdhD)
Enzymes [BR:baz01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     BAMTA208_09840 (pdhD)
Exosome [BR:baz04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   BAMTA208_09840 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_binding_2 FAD_oxidored HI0933_like NAD_binding_8 FAD_binding_3 NAD_binding_9 AlaDh_PNT_C Tox-PAAR-like Amino_oxidase DAO UDPG_MGDP_dh_N 3HCDH_N Thi4
Other DBs
NCBI-ProteinID: AEB24135
Position
complement(1943887..1945299)
AA seq 470 aa
MVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTVVEKGTLGGVCLNVGCIPSKALIN
AGHRYENAKHSDDMGITAENVKVDFTKVQEWKASVVNKLTGGVAGLLKGNKVEVVKGEAY
FVDSNSVRVMDENSAQTYTFKNAIIATGSRPIELPNFKYSERVLNSTGALALKEIPKKLV
VIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAM
AKGVEERPDGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTD
KQCRTNVPNIYAIGDIIDGPPLAHKASYEGKIAAEAIAGEPAEIDYLGIPAVVFSEPELA
SVGYTEAQAKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASA
SDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggtagtaggagatttccctattgaaacagatactcttgtgattggtgcgggacctggc
ggctatgtagctgccatccgcgctgctcagcttggacaaaaagtaacagtcgttgaaaaa
ggaactcttggtggcgtttgtctgaacgtcggctgtattccttcaaaagcgcttatcaat
gcaggccatcgttacgagaatgcaaaacattcagatgacatgggaatcactgctgagaac
gtaaaagttgactttacaaaagtccaagaatggaaagcttctgttgtaaataagcttact
ggcggtgttgcaggtcttttaaaaggaaataaagtcgaagttgtaaaaggcgaagcttat
ttcgtagacagcaactctgtccgcgtaatggatgagaactctgcgcaaacatatacattt
aaaaacgcgatcattgctaccggttctcgccctatcgaattgccaaacttcaaatatagc
gaacgcgttctgaactctacaggcgcactggcgcttaaagaaattccgaaaaagctcgtt
gttatcggcggcggatacatcggtactgagcttggaacagcgtatgcaaactttggaact
gaattggttattttagaaggcggagatgaaattcttcctggcttcgaaaaacaaatgagt
tctcttgttacccgcagactgaagaaaaaaggcaacgttgaaattcatacaagcgctatg
gctaaaggcgttgaagaaagacctgacggcgtaacagttacattcgaagtaaaaggcgaa
gaaaaaacggttgatgctgattacgtattaatcactgtcggacgccgtccgaacactgat
gagctcggtcttgagcaagtcggtatcgaaatgactgaccgcggtgtcattaaaacagac
aagcagtgccgcacaaacgtaccgaacatttacgcaatcggtgacatcattgacggacct
ccattggctcacaaagcgtcttacgaaggtaaaatcgctgcggaagctattgcaggagag
cctgctgaaatcgattacctcggtattccggcggttgtattctctgagcctgaactggct
tctgtcggttacactgaagcacaggcgaaagaagaaggcattgaagtcgttgctgccaaa
ttcccgtttgcagcaaacggacgcgcgctgtctcttaacgaaactgacggcttcatgaag
ctgatcactcgtaaagaagatggtcttgtgatcggtgcgcaaattgccggcgcaagcgct
tctgacatgatttctgaattgagcctggcgatcgaaggcggaatgactgctgaagatatc
gcaatgacaattcacgctcacccgacattgggcgaaatcacaatggaagctgccgaagta
gcaatcggaagcccgatccacatcgtaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (18)   
   Pfam (18)   
All databases (86)   

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