KEGG   Bacillus amyloliquefaciens TA208: BAMTA208_10440
Entry
BAMTA208_10440    CDS       T01824                                 
Symbol
ykoV
Name
(GenBank) ATP-dependent DNA ligase subunit
  KO
K10979  DNA end-binding protein Ku
Organism
baz  Bacillus amyloliquefaciens TA208
Pathway
baz03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:baz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BAMTA208_10440 (ykoV)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:baz03400]
    BAMTA208_10440 (ykoV)
DNA repair and recombination proteins [BR:baz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BAMTA208_10440 (ykoV)
SSDB
Motif
Pfam: Ku DUF6058
Other DBs
NCBI-ProteinID: AEB24255
Position
2058806..2059687
AA seq 293 aa
MHTMWKGSISFGLVNIPVKLFAATEDKDIKFRSLHKEDHAPIKYEKICTGCEKSLEPGEI
VKGYEYVKGKYVILTDEDLKDVKQEHEEKAVEIVDFVQLQEIDPIYFNRSYYVGPGDNGT
KAYTLLREALRTTGKIGIASITIRSKQQLAILRVYDNCIVMESIHYPDEVRNAGHVPGVP
EQTAVNEKELQTAITLINELTTEFDPEQYEDTYRKALLAKINDKLEHEEAGVTPAAPGPR
EDVIDLVSALQASIDRTKRPNREQAAPVRTKDTASAGGEGKKRKTTRQKAGTS
NT seq 882 nt   +upstreamnt  +downstreamnt
atgcacacgatgtggaagggttcgatcagcttcggcctcgtcaatatcccggtcaagctc
tttgcggccactgaagataaagatataaaattccgcagtcttcataaagaagaccatgcg
ccgattaaatacgaaaaaatctgtaccggatgtgaaaagagtctggagcctggtgaaatc
gttaaaggctatgagtatgtaaagggaaaatacgtcattttgacagacgaggacctgaaa
gacgtaaaacaggaacatgaagagaaagcggttgaaattgttgactttgtccagctgcaa
gaaattgatccgatttattttaaccggtcttattatgtcgggccgggagataacggcaca
aaagcctatacacttttgcgggaagcgctgaggacgacaggtaaaatcgggattgcctct
attacgatccgttctaagcagcagcttgcgattcttcgcgtgtatgacaactgtatcgtg
atggagtccattcattatccggatgaagtcagaaacgccggacatgtgccgggagttccc
gagcagacggccgtgaatgaaaaagaattgcagacggcgattacgttaataaacgagctg
acaaccgagtttgacccagagcaatacgaagacacataccggaaagccctcctcgccaaa
attaatgataagctcgaacatgaagaagcaggcgtgacaccggctgctcccggtccgcgc
gaagatgtcattgaccttgtcagcgccctgcaggcgagcattgaccggacgaagcggccg
aatcgcgagcaggctgcaccggtgcggacaaaagacactgcgtccgcaggcggcgaaggg
aaaaaacggaaaacgaccagacaaaaagccggaacgtcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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