KEGG T03079: EP01

Bdellovibrio bacteriovorus 109J: EP01_05755

Entry

EP01_05755        CDS       T03079

Name

(GenBank) ribonuclease III

K03685

ribonuclease III [EC:3.1.26.3]

Organism

bbac Bdellovibrio bacteriovorus 109J

Brite

KEGG Orthology (KO) [BR:bbac00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbac03019]
    EP01_05755
   03009 Ribosome biogenesis [BR:bbac03009]
    EP01_05755
   03036 Chromosome and associated proteins [BR:bbac03036]
    EP01_05755
Enzymes [BR:bbac01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     EP01_05755
Messenger RNA biogenesis [BR:bbac03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EP01_05755
Ribosome biogenesis [BR:bbac03009]
Eukaryotic type
  90S particles
   RNase
    EP01_05755
Prokaryotic type
  rRNA processing factors
   EP01_05755
Chromosome and associated proteins [BR:bbac03036]
Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     EP01_05755

SSDB

Motif

Pfam:

Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM

Other DBs

NCBI-ProteinID:

AHZ84439

Position

1210611..1211315

AA seq 234 aa
MIDQGRKSLEERVGHHFKNPALLERALTHKSFANELRNTVEHNEKLEFLGDAVLDLVVGE
FLYEKFPTDTEGGLSKKRASIVNEEVLSELALEMGLNKLMQLGKGEALTGGAQKPRLIAS
SFEAIVGALYLDGGFEVARSFIRQEFVPLADRVCGHEDFERDYKTRLQELVQKSSKETPR
YEVLAEEGPPHDREFLVCVKVKEDVWAQGRGRSKKNAEQMAAKNALEMKYKETN

NT seq 705 nt +upstreamnt +downstreamnt
atgatcgatcaggggcgaaagagtctggaagagcgtgtaggacatcactttaaaaacccg
gcactgctggaaagagcgctgacccacaagagttttgccaacgagctgagaaacaccgtt
gagcacaatgaaaagttggaatttttgggtgacgctgttttggatctggtggtgggagag
tttttgtatgaaaaattcccgaccgacaccgaaggtggtttgtcaaagaaacgtgccagt
attgtcaatgaagaggttctgtccgaactggcactggaaatgggtttaaataaactcatg
caactgggaaagggtgaagccctgaccgggggcgcgcagaagccgcgcctgatagcctct
tcgtttgaggccattgtcggggcgttgtacctggatggtgggtttgaagtggctcgcagc
tttattcgccaggagtttgttcctttggcggaccgggtctgcgggcatgaggacttcgag
cgggattataaaacccgtctgcaggaactggtgcagaagtcctcgaaagaaacgccacgc
tatgaagtgctggcggaagaaggacctccgcatgatcgtgagttcctggtttgtgtaaaa
gtaaaagaagatgtctgggctcaagggcggggccgcagtaagaaaaacgccgaacaaatg
gcggcaaagaatgcccttgagatgaagtacaaggagacgaattaa

All links

Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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