KEGG   Burkholderiales bacterium GJ-E10: E1O_03530
Entry
E1O_03530         CDS       T03654                                 
Name
(GenBank) excinuclease ABC subunit
  KO
K03701  excinuclease ABC subunit A
Organism
bbag  Burkholderiales bacterium GJ-E10
Pathway
bbag03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bbag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    E1O_03530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbag03400]
    E1O_03530
DNA repair and recombination proteins [BR:bbag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     E1O_03530
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      E1O_03530
SSDB
Motif
Pfam: ABC_tran UvrA_inter AAA_29 nSTAND1 AAA_16 AAA_21 SMC_N UvrA_DNA-bind Viral_helicase1 AAA_22 AAA_25 nSTAND3 AAA_33 AAA_18 NACHT ATPase APS_kinase NTPase_1 SbcC_Walker_B DnaJ_CXXCXGXG HypA
Other DBs
NCBI-ProteinID: BAP87484
UniProt: A0A0A1H2K8
Position
complement(384180..389999)
AA seq 1939 aa
MSPPSDRQRWIRIRGARQNNLRNLDLDLPTGNLIVVTGVSGSGKSSLVFDTLYAEGQRRY
VETFSPYARQFLDRMDRPAVDRIEGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLFA
RASQLHCRGCGRLVRPDTPASIAADLIARAAGTAPRETGVPEARRLVLTFPVRVPANFTE
DEIREHLAAQGYTRVHRSRRDGEAQTLAVVCDRLRWDALDDDRLREAAETAQRLGGGRVD
AWIADGTAAGHDADDAPWARYSAGLHCAHCDIRYPDPTPASFSFNSPVGACETCRGFGRV
IGVDHALVIPDGRKTLREGAIKPWQTKSFVECQQDMEKYAGQKSAREAGVDLDTPWAELP
DRARQWVLRGDPDWTGKWKTQWYGVDHFFEWLESRAYKMHIRVLLSRYRSYTSCPACGGT
RLKPDALLWTIAPGDGHAYTIHDLMLQPIDRLFALFDRPLPLRQDAEAIATQMILDEVRS
RLRFLCEVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDMQ
RVVGVMERLRDSGNTLVVVEHDPQIMLAADRILDMGPGPGDRGGKIVFNGTPEELARADT
ATGLYLSGRRKVGSPPGATSSPPPSPALAGEGVIRITGAREHNLRSLTVAFPLHRLVTVT
GVSGSGKSTLIQDVLYPALCRALGKPATAIGAHDRCLGAEQLADVALVDQSPIGKTTRSN
PASFVGAFDAIRKIFAQAPLAQERKYTAGTFSFNSGDGRCPTCGGNGFEHVEMQFLSDVY
LRCPDCDGKRFRAEVLAVEIERGGHMLSIADVLACTVAEAVDLFAQDRDVLRALAPLAEV
GLDYLRLGQPVPTLSGGEAQRLKIAGFLAETAKSSPERQRGTAKGALLLFDEPTTGLHFE
DIARLMRALRKLLVAGHSLIVIEHNLDVIRASDWVIDLGPEGGDAGGQIVAAGTPAEIAA
HPTSHTGRALREHEAAMRQWADPHPRPLPQAGEGVQHTDAGISYAGEGVQHTDAGISYAG
EGVQRTDTGISYAGEGVQRTDTGISYAGEGVQRTDARISYAGGEAIEIVGAREHNLRNAT
VAIPRDTFTVITGVSGSGKSTLAFDILFQEGQRRYLESLNAYARSMVQPAARPDVDAIHG
IAPTVSIEQRVSRGGRKSTVATQTELHHFLRLLYVKLGTQYCPDCNLPVEPQTFDAITAT
IAREWHGREIGVLAPLIVHRKGVYTELAQWAARKGHSHLRLDGRFVPTRPWERPDRFREH
SIDLPVGTILVQPEREADLRALLHTALEHGNGALEICWPMSALREAIAGGTAQDAVLEHR
TFSTKRACSGCGKSFSEPDPRMFSYNSKHGWCERCFGTGLQLSGFDAEHSGEEVWWNEWY
EGEETPCSACHGKRLNPTSLAVRFDGRSIADVGAMTVEQARTWIGGLVLDGRAAEIARDA
TAEVRSRLDFLLEVGLGYLALDRAAPTLSGGESQRIRLAAQLGSNLQGVCYVLDEPTIGL
HARDNDILLRALRKLESRGNTLVVVEHDEETIRAAEHCIDVGPGAGSRGGRIVAQGRVED
LIACPESVTGAHLRPGAMQPPDQVRTVDADTMRLRVRGAHLHNLQGLDVDIPLGRLVVVT
GVSGSGKSTLARDVLLSNLRREGPPMHGCTAIDGREHIARVLEVDQTPIGKTPRSCAATY
VGIWDEIRKRFADTTEARMRGFTASRFSFNTTGGRCPECEGQGVRTIEMSFLPDVKILCE
RCGGKRFEPATLEVLWRGRSVGDVLAMEVDEAVEFFAATPRIAHPLRLLQQVGLGYLTLG
QPSPTLSGGEAQRIKLVTELAKARGEIGASNRKARSAPQSHTLYVLDEPTVGLAMADVRL
LLQALHRLVDAGNSVIVVEHNLDLIAHADWIIDLGPEGGDAGGRVVACGPPRSIAAQSSP
TGAALARSFRTGRGDPVSS
NT seq 5820 nt   +upstreamnt  +downstreamnt
atgagtccgccgtcggatcgacagcgctggatccgcatccgcggcgcgcgccagaacaat
ctgcgcaacctcgacctggatcttccgaccgggaacctgatcgtggtgaccggagtctcc
ggctccgggaaaagctcgctcgtcttcgacacgctctacgccgaagggcagcggcgctac
gtcgaaaccttctcgccgtatgcacgccagttcctcgaccgcatggatcggcccgcggtc
gaccgcatcgagggcgtgccgcctgcgatcgcaatcgaccagaccaacccggtccgcagt
tcgcgcagcacggtcggcacgatgacggagctcaacgatcacctgaagctgctctttgcg
cgcgcaagccaactgcattgccggggctgcggccgcctggtccggccggacaccccggcg
tcgatcgccgcagacctgatcgcgcgggcagccggcaccgcgccgcgcgaaaccggcgtc
ccggaggcaaggcgcctggtgctcacctttcccgtccgcgtgcccgccaacttcaccgag
gacgagatccgcgaacaccttgcggcgcaaggctacacacgcgtgcatcgcagccgccgg
gacggcgaggcacaaacgctcgcggtggtctgcgaccgcctgcgctgggacgccctcgac
gacgaccgcctgcgggaagccgcggaaaccgcgcaacggctcggcggcggacgcgtcgac
gcgtggatcgccgacggcaccgcggcgggacatgatgccgacgatgcgccctgggcgcgc
tattcggcgggcctccactgtgcgcactgcgacatccgctacccggacccgacgccggca
agcttttccttcaattcacccgttggcgcctgcgagacctgtcgcggtttcggccgggtg
atcggcgtcgatcacgcgctcgtcattccggatggccgcaagacgttgcgcgagggtgcg
atcaaaccctggcagaccaagagtttcgtcgaatgccagcaggacatggagaagtacgcg
ggacagaagtccgcccgcgaggccggcgtggatctcgacacgccgtgggccgaactgccg
gaccgcgcacgccaatgggttctccggggcgacccggactggaccgggaaatggaagacc
cagtggtacggcgtggaccactttttcgaatggctcgaatcccgggcgtacaagatgcac
atccgcgtgctcctgtcgcggtaccgctcgtacacgagctgcccggcctgcggcggcacg
cggctcaagcccgatgcgctgctgtggacgatcgcgccgggcgacggccacgcctacacc
attcacgatctgatgctgcagccgatcgatcggctgttcgccctgttcgaccgcccgctc
ccgctccggcaggacgccgaagcgattgccacccagatgatcctcgacgaggttcgatcc
cgcctgcgattcctctgcgaagtcggactcggctatctcaccctcgatcgccagagccgc
acgctctccggtggcgaagtgcagcggatcaatctgacgacggcgctcggcacctcgctc
gtcaacaccctgttcgtcctcgacgaaccctcgatcggcctgcatccgcgcgacatgcaa
cgggtggtcggcgtcatggaaaggctgcgcgacagcggcaacacgctcgtcgtggtcgag
cacgacccgcagatcatgcttgccgccgatcgcatcctggacatgggcccggggccgggg
gatcgcggcgggaagatcgtgttcaacggcacgcccgaagaactggcccgcgcggatacc
gccaccggactctacctgagcggaaggcggaaagtagggtctccccccggagcgacatcc
tcgcccccgccctctcccgccctcgcgggagagggggttatccgcatcaccggcgcccgc
gaacacaaccttcggtcgctcaccgtcgccttcccgctgcaccgcctcgtgacggtgacc
ggcgtatccggatccggcaaatcgaccctgatccaggatgtgctgtatcccgcgctttgc
cgagccctggggaaacccgcgacggcgatcggcgcgcacgaccgttgcctcggcgccgag
caactcgccgacgtcgccctcgtcgaccaatcgccgatcggcaagactacccggtccaac
cccgccagcttcgtcggcgcgttcgatgcgatccgcaagatctttgcccaggccccgctg
gcgcaggaacgcaaatacacggccggaaccttcagcttcaactccggcgacggccgctgc
cccacctgcggcggcaacggattcgagcacgtcgagatgcagttcctctcggacgtctat
ctgcgctgcccggactgcgacggcaagcgcttccgcgccgaggttctcgcggtggagatc
gagcgtggcggccacatgctttcgatcgccgacgtccttgcctgcaccgtcgccgaagcg
gtggacctgtttgcgcaggaccgtgacgtgctgcgggcgctcgcccccctcgccgaggtc
ggcctggactatctgcgcctcggccagcccgtaccgacgctctcgggcggcgaggcgcaa
cgcctgaagatcgccggcttcctcgccgagaccgccaagagcagtccggaacgccagcgc
ggcaccgccaaaggcgcgctcctgcttttcgacgaacccaccaccggcctgcacttcgaa
gacatcgcgcgactgatgcgcgccctgcgcaagctgctggtggccgggcactcgctgatc
gtgatcgagcacaatctcgacgtcatccgcgcatcggactgggtcatcgatctcggcccg
gaaggcggggatgcgggcgggcagatcgttgccgccggaacaccggcggagattgcggcg
cacccgacgtcgcataccgggcgcgcgctgcgggagcatgaagcggcgatgcggcaatgg
gccgaccctcacccccgccctctcccgcaggcgggagagggggtgcagcataccgacgcc
gggatttcgtacgcgggagagggggtgcagcataccgacgccgggatttcgtacgcgggc
gagggggtgcagcgtaccgacaccgggatttcgtacgcgggcgagggggtgcagcgtacc
gacaccgggatttcgtacgcgggcgagggggtgcagcgtaccgatgcgaggatttcgtac
gcgggaggggaggccatcgagatcgtcggcgcccgcgagcacaatctccgcaacgccacc
gtcgccatcccccgcgacacgttcaccgtcatcaccggcgtctccggcagcggcaagtcc
acgctcgccttcgacatcctgttccaggaagggcagcggcgctacctcgaatcgctcaac
gcgtacgcgcgctcgatggtccagccggcggcgcgcccggacgtcgacgcgatccacggc
atcgccccgacggtctcgatcgagcagcgcgtcagccgcggggggcgcaagagcacggtc
gcgacgcagaccgaactgcaccatttcctgcgcctgctctacgtcaagctcggcacccag
tattgccccgactgcaatctgccggtggagccgcagaccttcgatgcgatcacggcaacg
atcgcccgggaatggcacggccgcgagatcggcgtgctcgcccccctgatcgtccaccgc
aaaggggtctacaccgaacttgcgcaatgggccgcgcgcaagggccatagccatctgcgc
ctcgacgggcgcttcgttccgacgcgtccctgggagcggccggaccggtttcgcgagcat
tcgatcgacctgccggtcggtaccatcctggtccagccggagcgcgaagcggatctgcgc
gccctgctgcacacggccctggagcacggcaacggcgcgctggaaatctgctggccgatg
tcggcactgcgcgaggccatcgccggcggcaccgcgcaggacgccgttctggagcaccgc
acgttctcgaccaagcgcgcgtgttccggttgcggcaagtcgttttccgaacccgatccg
cggatgttctcctacaactccaagcacggctggtgcgaacgctgtttcggcaccggcctg
caactctccggcttcgacgccgagcacagcggcgaagaggtctggtggaacgagtggtac
gaaggcgaggagacgccctgttcggcctgccatggcaagcggctcaatcccacgtcgctc
gcggtgcgcttcgacggacgctcgatcgccgatgtcggcgccatgaccgtggagcaggcg
cggacatggatcggcgggctcgtgctcgatggccgcgccgcggagatcgcccgggacgcg
accgccgaggtccgatcgcggctcgacttcctgctcgaggtcggtctggggtatctggca
ctggaccgggcggcgcccacgctttcgggcggcgagtcgcaacgcatccgcctcgccgcg
caactgggctccaatctgcagggcgtctgctacgtgctcgacgaacccacgatcggcctc
cacgcccgcgacaacgatatcctgctgcgcgcactgcgcaagctcgagtcgcgcggcaat
acgctggtggtggtcgagcacgacgaggaaacgatccgcgccgccgagcattgcatcgac
gtcgggccgggcgccggttcgcgcggcggacggatcgtcgcgcaaggacgcgtcgaggat
ctgatcgcctgtcccgagtcggtcaccggcgcgcatctgcggcccggtgcgatgcagccg
ccggatcaggtgcgcacggtcgacgccgacaccatgcggctgcgcgtgcgcggcgcccat
ctgcacaacctgcagggcctggatgtcgacatccccctggggcgtctggtggtcgtgacg
ggcgtgtcgggaagcggcaagtcgacgctggcgcgggacgtgctgctgtcgaacctgcgg
cgggaaggacctcccatgcacgggtgcacggcgatcgacgggcgcgagcacatcgcccgc
gtcctcgaagtcgaccagaccccgatcggcaagacgccccgctcctgtgcggcgacctac
gtcggcatctgggacgagatccgcaagcgcttcgccgacaccaccgaagcgcgcatgcgc
ggtttcaccgcgagtcggttttccttcaacacgacgggcggccgctgccccgaatgcgaa
ggccagggcgtacgcacgatcgagatgagcttcctgccggacgtcaagattctctgtgaa
cgctgcggcggcaagcgcttcgaaccggctacgctggaggtgctgtggcgcggcaggagc
gtgggcgacgtcctggcgatggaagtcgacgaggcggtggagttctttgccgcaacgccg
cggatcgcccatcccctgcgcctgttgcagcaggtcgggttgggatacctgacgctcggc
cagccctcgcccaccctgtccggaggcgaggcgcagcggatcaaactcgtcaccgaactc
gccaaggcccgcggcgagatcggcgcatcgaaccgcaaggcgcgatccgccccgcagtcc
cacacgctgtacgtgctcgacgaacccaccgtcggcctagcgatggccgacgtgcgcctg
ctgctgcaggcgctgcaccggctggtcgatgccggcaacagcgtgatcgtcgtcgaacac
aatctggacctgatcgcccatgccgactggatcatcgacctggggccggagggcggcgac
gccggaggccgcgtcgtggcgtgcgggccgccgcgttcgatcgccgcgcagtccagtccg
acgggagcggcgctcgcccggagtttccgcaccgggcggggagacccggtgtcctcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (67)   

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