KEGG   Beijerinckiaceae bacterium RH AL1: RHAL1_02592
Entry
RHAL1_02592       CDS       T06029                                 
Symbol
speF
Name
(GenBank) Inducible ornithine decarboxylase
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
bbar  Beijerinckiaceae bacterium RH AL1
Pathway
bbar00330  Arginine and proline metabolism
bbar00480  Glutathione metabolism
bbar01100  Metabolic pathways
bbar01110  Biosynthesis of secondary metabolites
bbar04148  Efferocytosis
Module
bbar_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:bbar00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    RHAL1_02592 (speF)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    RHAL1_02592 (speF)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    RHAL1_02592 (speF)
Enzymes [BR:bbar01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     RHAL1_02592 (speF)
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase CsrA
Other DBs
NCBI-ProteinID: VVC55670
UniProt: A0A5E4NZF6
Position
1:complement(2603498..2605891)
AA seq 797 aa
MDFFRRFTFLVCTPGFQSDDLEGQRLTEIVGAVERMGFQVVKARRVEDAEIAVQTDAAIG
CMVVDWGKKGLEGKAAALIDLMRRRGLDMPIVVLVRRKRFADIPVEVMDYIDGYVFLAEE
TPEFIARNLVSRLKQYAETLKTPFFGALVDYAEEGNQLWTCPGHNGGIFYNRSPIGRIFV
EHLGEAVFRDDLDNSVLELGDLLTHEGPALRAQKEAAKIFGAEKTYFVLNGTSTSNKVVL
AALIAEGDLVLFDRNNHKAAHHGALLIAGGVPVYLPTDRNAYGLIGPIYADALDEEAIRE
QIRTNPLVSDPDAWRRPRPFRVAVIEQCTYDGTIYSAEAVVAKIGHLCDYILFDEAWASF
MKFHPLYAGRFAMGLSNLGPDSPGIIATQSTHKQLASFSQASQIHIKDRHIKGQARRVEH
RRFNESFMRYASTSPFYPLFASLDVGAQMMKGRSGVVLWDDTVRLGIEVRKKVRAMRREI
EEREKVPDRRWFFEPFVPDVVSVADPATPGATIEVPWESVSTDELAADSRFWALQPGRAW
HGFDHLAADFAITDPAKLTLLTPGFDRATGAYTDLGIPAPVVAEYLRENQVVPEKNDLNS
LLFLLTPGVESSKAGTLMSALAAFKKLHDDNAPLDEVLIDFVRRRPARYRGLRLRDLCAE
MHAFYRAAGTSALQQAQFKPQHMPEIVMSPHEADQLLVRNKVDYLPISQVDDRVATTLFV
VYPPGIATIVPGERLGPRARPMLDYLKTFERGANLFPGFEAEIQGLFREVAEDGAVVFHT
YVVKEAAAREMAERRRA
NT seq 2394 nt   +upstreamnt  +downstreamnt
atggatttcttccgccgcttcacgttcctcgtctgcacgccgggcttccagtccgacgac
ctcgaagggcagcgcctcaccgagatcgtcggcgcggtcgagcgcatggggttccaggtc
gtcaaggcgcggcgcgtcgaggatgccgagatcgccgtgcagaccgatgccgccatcggc
tgcatggtcgtcgactggggcaagaagggtctcgagggcaaggcggcggcgctgatcgac
ctgatgcgccggcgcggcctcgacatgccgatcgtcgtgctggtgcgccgcaagcgcttc
gccgacatccccgtcgaggtgatggactacatcgacggctacgtcttcctcgccgaggag
acgccggagttcatcgcccgcaacctcgtctcgcgcctcaagcaatatgccgagacgctg
aagacgccgttcttcggcgcgctggtcgattacgcggaggagggcaaccagctctggacc
tgccccggccacaacggcggcatcttctacaaccgcagcccgatcggccgcatcttcgtc
gagcatctcggcgaggcggtgttccgcgacgacctcgacaattccgtgctcgagctgggc
gatctcctgacccacgaaggccccgcgctgcgcgcgcagaaggaggccgcgaagatcttc
ggggcggagaagacgtactttgtcctcaacggcacctcgacgtcgaacaaggtggtgctc
gccgcgctgatcgccgagggcgacctcgtgctgttcgaccgcaacaaccacaaggcggcg
catcacggcgcgctgctgatcgccggcggtgtgccggtctacctgccgaccgaccgcaac
gcctacgggctgatcggcccgatctacgccgacgcgctggacgaggaggcgatccgcgag
cagatccgcaccaatccgctggtgagcgaccccgacgcctggcggcggccgcggccgttc
cgcgtcgcggtgatcgagcagtgcacctacgacggcacgatctactcggccgaggcggtg
gtcgccaagatcggccacctctgcgactacatcctgttcgacgaggcgtgggcgagcttc
atgaagttccacccgctctacgccgggcgcttcgcgatggggctctcgaatctcgggccg
gactcgcccggcatcatcgccacgcagtcgacgcacaagcagctcgcgagcttctcgcag
gcctcgcagatccacatcaaggaccgccacatcaagggccaggcgcggcgcgtcgagcat
cgccgcttcaacgagagcttcatgcgctacgcctcgacgtcgccgttctatccgctgttc
gcctcgctcgacgtcggcgcgcagatgatgaagggccgctccggcgtcgtgctgtgggac
gacacggtgcggctcggcatcgaggtgcgcaagaaggtgcgcgcgatgcgccgcgagatc
gaggagcgcgagaaggtgcccgaccggcgctggttcttcgagcccttcgtgcccgacgtg
gtgagcgtcgccgaccccgccacgcccggcgcgacgatcgaggtgccatgggaatcggtc
tcgacggacgagcttgccgccgactcgcgcttctgggcgctccagcccggccgcgcctgg
cacggcttcgaccacctcgccgccgatttcgcgatcaccgatcccgccaagctcaccctg
ctgacgccgggcttcgatcgcgcgaccggcgcctacaccgatctcggcatccccgcgccg
gtcgtcgccgagtacctgcgcgagaatcaggtggtgccggagaagaacgacctcaactcg
ctgctcttcctgctgacgcccggcgtcgaatcgtcgaaggccggtacgctgatgagcgcg
ctcgccgccttcaagaagctgcacgacgacaacgcgccgctcgacgaggtgctgatcgac
ttcgtgcggcgccggccggcccgctaccgcggcctgcgcttacgcgacctctgcgccgag
atgcacgccttctatcgcgccgccggcaccagcgcgctgcagcaggcgcagttcaagccg
caacatatgcccgagatcgtgatgagcccgcacgaggccgatcagctcttggtgcgcaac
aaggtcgactacctgccgatctcgcaggtcgacgatcgcgtcgccaccacgctgttcgtg
gtctacccgccgggaatcgcgaccatcgtgcccggcgagcgcctcgggccgcgcgcccgc
ccgatgctcgactacctcaagaccttcgagcgcggcgccaacctgttccccggcttcgag
gccgagatccagggcctgttccgcgaggtcgcggaggacggcgccgtcgtcttccacacc
tacgtggtcaaggaggcggcggcgcgcgagatggccgagcggaggcgcgcatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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