KEGG T02356: Bdt

Bdellovibrio bacteriovorus Tiberius: Bdt_1179

Entry

Bdt_1179          CDS       T02356

Symbol

spoU

Name

(GenBank) putative RNA methylase

K00556

tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]

Organism

bbat Bdellovibrio bacteriovorus Tiberius

Brite

KEGG Orthology (KO) [BR:bbat00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bbat03016]
    Bdt_1179 (spoU)
Enzymes [BR:bbat01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.34  tRNA (guanosine18-2'-O)-methyltransferase
     Bdt_1179 (spoU)
Transfer RNA biogenesis [BR:bbat03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    Bdt_1179 (spoU)

SSDB

Motif

Pfam:

SpoU_methylase SSB PepSY_2

Other DBs

NCBI-ProteinID:

AFY00879

UniProt:

K7Z8U0

Position

1242881..1243591

AA seq 236 aa
MFPYGPELEINANLRVNYQLVLEKIGPLLTDERRQKIEKVVALRNFDTAVVLEGIYDRGN
ISAVMRSAEGLGFGNFHVIETQEKFKEANRVTQGADKWVEVKKWKKTADCVKALKNQGYK
IYVTHLDANAKPLHEIDFSGKSALVLGNERDGVTPEMIAAADQTIIIPMTGFVQSFNISV
AGALGLYHISQDRLNRRGTNASLTDEEQGILRAHYYMRTQDSAAQYLEEMFSRGNL

NT seq 711 nt +upstreamnt +downstreamnt
atgttcccatacgggcccgaacttgaaatcaatgccaatcttcgcgtgaactaccagctg
gtgctggagaagatcgggcccctgctgactgatgaacgccgccagaagatcgaaaaagtg
gtggcgcttcgcaattttgacacggccgtggtgcttgagggcatctatgaccgtggcaat
atttctgccgtgatgagatccgctgagggtcttggatttggcaatttccatgttattgaa
acccaggaaaaattcaaagaagccaatcgtgtcacccaaggggctgacaagtgggtcgaa
gtcaaaaaatggaaaaagactgcggactgcgtgaaggctttgaagaatcagggttacaaa
atctatgtgacccatctggatgcaaacgccaaacctctgcatgaaattgacttcagcggc
aagagcgctctggtgcttggtaacgagcgcgacggtgtgaccccggaaatgattgcagcg
gccgatcagacgatcatcattcccatgacgggctttgtgcaaagtttcaacatttccgtg
gctggtgccctgggtctgtatcatatttcccaggaccgactgaaccgccgtggaaccaac
gcctccctgactgatgaagagcaggggatcttgcgtgctcactattacatgagaacccag
gacagtgcggcccagtatctggaagaaatgttttcccgcggaaatctgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

Download RDF

DBGET integrated database retrieval system