KEGG   Bifidobacterium animalis subsp. lactis BB-12: BIF_00563
Entry
BIF_00563         CDS       T01840                                 
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
  KO
K03550  holliday junction DNA helicase RuvA
Organism
bbb  Bifidobacterium animalis subsp. lactis BB-12
Pathway
bbb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bbb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BIF_00563 (ruvA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbb03400]
    BIF_00563 (ruvA)
DNA repair and recombination proteins [BR:bbb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BIF_00563 (ruvA)
    RecFOR pathway proteins
     BIF_00563 (ruvA)
SSDB
Motif
Pfam: RuvA_N HHH_5 RuvA_C HHH HHH_2 RecR_HhH DM13
Other DBs
NCBI-ProteinID: ADC85841
Position
complement(949182..949805)
AA seq 207 aa
MIGMLKGRVESVDTSNAVVDVHGVGFELRMPSNDLTAMHMGQDVKIYTSMSVSQDAITLF
GFLDARSKRMFLQLQKVSGVGPKVALSLLSTLAPDDLAQAIHDGDDKALSRAPGLGRKGA
QKIILELKGSIDVDKIETGEPTSTQRIPTDKGVEQVVEGLMSLGWKQADAQQAVDSVISS
SGIALPLEEGNVPTVLRLALTSLDRGR
NT seq 624 nt   +upstreamnt  +downstreamnt
atgatcggaatgctcaagggccgggtcgagtcggtggacacttccaatgcggtggtggac
gtccatggggttggattcgaattgcgtatgccttccaacgatctcaccgccatgcatatg
ggccaggacgtcaaaatatacacatccatgagcgtctcgcaggacgccatcacgctgttc
ggattcctcgacgccagatcgaaacgcatgttcctccagctgcagaaggtgagtggcgtc
ggaccgaaggtggcgctttcgcttctgagcacgctggcccccgacgaccttgcacaggca
atccacgacggtgacgacaaggccttgtcacgcgcccccggtctgggccggaaaggtgcc
cagaaaatcatcctggagctcaagggctcgattgacgtcgacaaaatcgaaacaggggag
ccaacttccacgcaacgcatcccaaccgacaagggggtcgaacaggtggttgagggtctc
atgtcgctgggctggaagcaggcggatgcacagcaggctgtggattcggtcatttcctcc
agtggcatcgcgttgccactggaggaaggcaatgtgccgactgtgctcagactggcattg
acatcactggacagagggaggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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