KEGG   Bifidobacterium animalis subsp. lactis BB-12: BIF_00761
Entry
BIF_00761         CDS       T01840                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
bbb  Bifidobacterium animalis subsp. lactis BB-12
Brite
KEGG Orthology (KO) [BR:bbb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bbb03016]
    BIF_00761 (truB)
Enzymes [BR:bbb01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     BIF_00761 (truB)
Transfer RNA biogenesis [BR:bbb03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BIF_00761 (truB)
 Prokaryotic type
    BIF_00761 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: ADC85436
Position
491219..492271
AA seq 350 aa
MGTGKRDAKVNGVLIVDKPQGVTSHDIVAAVRAALHTRKVGHAGTLDPMATGALVIGVGH
ATRLLQYIVEHTKTYSATIRFGQRTTTDDADGEFVEREAEAAVLPTLEQVREAVANEYTG
DIEQIPNAVSAIKVNGQRAYDLAREGRHVELKARRVTVHAFDVLGGRQTQAANGTPVLDV
DVRVTCSAGTYIRALARDLGNDFHCGAHLTRLRREAVGAFRVRDARIVRAHAEARTFVNR
DGEEITRNRAVLDCVGEDLAGHLLTMVQAAQLTLPVLAVSEAQAADLRFGRRIVAQAPTD
DERPAHHHGEHVWAAIGSADGEPEVVAIVERAKHHEFKPVTVFAANTGNE
NT seq 1053 nt   +upstreamnt  +downstreamnt
gtgggcaccggaaaacgcgacgcgaaggtgaacggcgtgctcattgtagacaagccgcag
ggcgtgaccagtcacgacatcgtggcggccgtgcgtgccgcgctgcacaccaggaaggtg
gggcacgccggcacgctcgacccgatggccaccggcgcgctcgtgatcggcgtgggtcat
gccacacgtctgctgcagtacattgtcgagcacacgaaaacctacagcgccacgattcgc
ttcggccagcgcacaaccaccgatgacgccgacggcgagttcgtggagcgggaagccgag
gccgccgtgctgccgacgctcgaacaggtgcgcgaagccgtggcgaacgaatacaccggc
gacatcgagcagattccaaacgccgtctccgcgatcaaggtgaacggccaacgcgcctac
gatctggcccgtgaaggccggcatgtcgagctcaaggcgcgccgggtgaccgtgcatgcg
ttcgatgtgctcggtggtcggcaaacgcaggccgcgaacggcacgccggtgctcgatgtc
gacgtgcgcgtcacctgctcggcgggcacctacattcgcgcgctcgcccgcgatctcggc
aatgatttccattgcggcgcgcatctgacccgcctgcgcagggaagcggtgggggcgttc
cgcgtgcgtgacgcccgcattgtgcgcgcgcatgccgaggcacgcaccttcgtgaaccgc
gacggcgaggagatcacccgcaatcgcgcggtgctcgattgtgtgggggaagatttggcc
gggcatctgctcacgatggtgcaggccgcacagctcacgctgccggtgctcgccgtgagt
gaagcgcaggcggcggatttgcgttttggtaggagaatcgttgcacaggcaccgaccgac
gatgaacgaccggcacaccaccacggcgagcacgtgtgggccgccattgggtccgccgat
ggcgagcctgaggtcgtggcgattgtcgagcgcgcgaaacaccacgaattcaagccggta
acggtgttcgctgcgaatacgggaaacgaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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