KEGG   Salisediminibacterium beveridgei: BBEV_0748
Entry
BBEV_0748         CDS       T05114                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
bbev  Salisediminibacterium beveridgei
Brite
KEGG Orthology (KO) [BR:bbev00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bbev03016]
    BBEV_0748
Enzymes [BR:bbev01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     BBEV_0748
Transfer RNA biogenesis [BR:bbev03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    BBEV_0748
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: AOM82119
UniProt: A0A1D7QSZ3
Position
828330..828887
AA seq 185 aa
MEPHYFIGIPLHEDLQQETVTWHRRLQADELFKRVTHPEDLHLTLLFFGGFSPMHVERIW
ERMKQAVLPIPLALTFRRLNHFGDAIQPRVVYVEPDHQEALFELKRIIDQEAEKENFPVS
SKVFTPHVTIMKKWKNREVTMPDCHLFPQELASPVAVLADRICLYRIHPDQKPSYEIVDE
IRESR
NT seq 558 nt   +upstreamnt  +downstreamnt
atggaacctcactattttatcggtatccccttacatgaggatcttcaacaagaaactgta
acatggcatcgaagattgcaggcagacgagctctttaaacgcgtcactcatccggaagat
ctccatttgacgctgttgtttttcggtggattctcaccaatgcatgttgaaagaatctgg
gaaagaatgaaacaggctgtactgccaatcccgttagcattaacgtttcggaggttgaat
cactttggggacgccattcagccccgagtggtatacgttgaaccggaccatcaggaagca
ctctttgaactaaagcggatcatcgatcaggaagctgaaaaggaaaattttccagtatcg
tcgaaagtcttcactccccatgttacaataatgaaaaagtggaagaacagagaagtaacg
atgccggattgccatctgtttccgcaagagttagcttctccagttgcggtgttggcagac
cggatttgcctgtaccgcattcatcccgatcaaaaaccatcgtatgaaatcgtggatgag
atcagagaaagcaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system