KEGG   Salisediminibacterium beveridgei: BBEV_3219
Entry
BBEV_3219         CDS       T05114                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
bbev  Salisediminibacterium beveridgei
Pathway
bbev03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bbev00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BBEV_3219 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbev03021]
    BBEV_3219 (rpoA)
   03400 DNA repair and recombination proteins [BR:bbev03400]
    BBEV_3219 (rpoA)
Enzymes [BR:bbev01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BBEV_3219 (rpoA)
Transcription machinery [BR:bbev03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BBEV_3219 (rpoA)
DNA repair and recombination proteins [BR:bbev03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BBEV_3219 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L SpoIVA_ATPase HHH_5 RAD51D_N
Other DBs
NCBI-ProteinID: AOM84534
UniProt: A0A1D7QZU0
Position
complement(3431835..3432779)
AA seq 314 aa
MIEIEKPKIEAVELSEDGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGSAVTSVQFNN
VLHEFSTIEGVVEDVTTIILNLKKLSMKVFSEEEKTLEIDAQGEGVVTARDLTHDSDVEV
LNPDLHIATLSKGAQFQMKVTAKRGRGYVPAEGNNSDDLPIGVIPVDSIFTPVSRVNYQV
ENTRVGQVANFDKLTLDVWTDGSIRPEEATSLGAKILNEHLNIFVGLTDQAQHTEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQKSEEDMMKVRNLGRKSLEEVQ
EKLHELSLGLRKEE
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatcgaaatagaaaagccgaagatagaagcagttgaactgagtgaagatggcacgtac
ggcaagtttgtcgttgaaccgcttgagcgcggttatggcacaacgttggggaactccctg
cgtcgtattcttttgtcatcattgccaggatcagctgtgacaagtgtgcagttcaacaat
gttcttcatgagttctcaaccattgaaggtgtcgtggaagacgtgactacgatcattctg
aatctgaagaagctttcaatgaaggtcttctcagaagaagagaagaccctggaaatcgat
gcgcaaggtgaaggagtcgtaacggctcgcgacctgacgcatgacagtgacgtggaggtt
ctgaaccccgaccttcatattgccactctctcaaaaggcgctcagtttcaaatgaaagtg
actgctaaacgaggccgtggctatgttccggcagaaggaaataactctgatgatttgcca
atcggcgtcatccctgtcgactcgattttcacaccggtttcccgtgtgaattaccaggta
gagaatacacgtgttggccaggtggccaactttgataaactgactctggatgtttggacg
gacgggagcatccgcccggaagaagcgacttctctcggagcgaaaatcctgaatgaacat
ctgaacatttttgtcggcctgacggatcaggcccagcacacagaaatcatggtggaaaag
gaagaagatcagaaagagaaagtgcttgagatgaccatcgaagagctcgacctttccgtt
cgttcctacaactgcctgaagcgtgccgggatcaataccgttcaggaactgacacagaaa
tcagaagaggacatgatgaaagttcgtaacctcggacgaaagtccctggaagaagtgcag
gaaaagctgcatgaactgagtctgggtcttcgtaaggaagaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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